AT1G74490.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase 2B (TAIR:AT2G02800.2); Has 113194 Blast hits to 112071 proteins in 4148 species: Archae - 81; Bacteria - 12715; Metazoa - 42174; Fungi - 9166; Plants - 32331; Viruses - 354; Other Eukaryotes - 16373 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:27994760..27996496 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44648.60 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.03 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.40 | ||||||||||||||||||||||||||||||||||||||||
| Length | 399 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGNCFESCSK RNDNEDDNLD SSVNSKPFSR ANSDTGRSSN LSYPWSLKPL ITRKCEAISA LPPPHKEGDI MHSQYLKSFT LDELKNATGN FCPESLIGEG 101: GFGFVHKGCI NGGPGIELAV AVKKLKTEGL QGHKEWLREV NYLGRLHHPN LVKLIGYSLE NEHRLLVYEH LPNGSLENHL FERSSSVLSW SLRMKVAIGA 201: ARGLCFLHEA NDQVIYRDFK AANILLDSGF NAKLSDFGLA KEGPKDNRSH VTTEVMGTEG YAAPEYLATG HLTTKCDVYS FGVVLLEILS GRRVIDKSKS 301: REEENLVDWA TPYLRDKRKV FRIMDTKLVG QYPQKAAFMM SFLALQCIGD VKVRPSMLEV VSLLEKVPIP RHRKSRSKGF ACTNSASMPS KRFLRHPKD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)