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AT1G73970.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.780
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 34 Blast hits to 33 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHR4eggNOG:ENOG410YNA2EMBL:CP002684EnsemblPlants:AT1G73970
EnsemblPlants:AT1G73970.1entrez:843735GeneID:843735Gramene:AT1G73970.1
hmmpanther:PTHR36337hmmpanther:PTHR36337:SF1InParanoid:F4HTS4InterPro:IPR016024
KEGG:ath:AT1G73970OMA:TEPCKKIPaxDb:F4HTS4PRIDE:F4HTS4
ProteinModelPortal:F4HTS4Proteomes:UP000006548RefSeq:NP_177537.2SUPFAM:SSF48371
TAIR:AT1G73970UniGene:At.34935UniProt:F4HTS4
Coordinates (TAIR10) chr1:+:27817140..27819963
Molecular Weight (calculated) 89170.00 Da
IEP (calculated) 6.67
GRAVY (calculated) 0.18
Length 803 amino acids
Sequence (TAIR10)
(BLAST)
001: MARKANNSFF LEEWLRTVSG SSVSGDLVKQ NSAPSARSII QAWSEIRESL QNQNFDSRYL QALRALVSSE STIHVADPQA KLLISILAFQ DVSLPSESYT
101: LVLRLLYVWI RKAFRPSQAL VGVAVQAIRG VVDDRRNLQP ALVAQSVLVS GAFACVPSLS GDVKVLCLEL LCRLLEEEYS LVGSQEELVP VVLAGIGYAL
201: SSSLDVHYVR LLDLLFGIWL KDEGPRGTVT YGLMILHLIE WVVSGYMRSN SINKMSLFAN EVLETSKEKY AVFAVFMAAA GVVRASTAGF SSGAQSLEIS
301: KLRNSAEKRI EFVAQILVSN GNVVTLPTTQ REGPLLKCFA IALARCGSVS SSAPLLLCLT SALLTQVFPL GQIYESFCNA FGKEPIGPRL IWVREHLSDV
401: LFKESGAISG AFCNQYSSAS EENKYIVENM IWDFCQNLYL QHRQIAMLLC GIEDTLLGDI EKIAESSFLM VVVFALAVTK QWLKPIVSKE RKMVTSVKIL
501: VSFSCVEYFR HIRLPEYMET IREVISCVQE NDAPCVSFVE SIPAYDSLTN PKDLFTQRIK YEWSRDDVQT SRILFYLRVI PTCIGRLSAS AFRGVVASTM
601: FLYIGHPNRK VAQASHTLLA AFLSSAKESE EDERTQFKEQ LVFYYMQRSL EVYPEITPFE GLASGVATLV QHLPAGSPAI FYSVHSLVEK ASTFSTESLQ
701: GRKSDPGNQI LELLLRLVSL VDIQVLPYLM KSLAQLVIKL PKERQNVVLG ELYGQVAESD DVIRKPSLVS WLQSLNYLCS NNRTEVLASG STIDTSNQLA
801: ARL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)