AT1G70530.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a cysteine-rich receptor-like protein kinase. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (CRK3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 119727 Blast hits to 118238 proteins in 4920 species: Archae - 112; Bacteria - 13995; Metazoa - 44248; Fungi - 9864; Plants - 33587; Viruses - 452; Other Eukaryotes - 17469 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:26588750..26591379 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 71615.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.54 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 646 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MPILTLLLLI LGLFISPSVS DSRGDTVAQI CNNRTTTPQQ RSLFVTNFLA AMDAVSPLVE AKGYGQVVNG TGNLTVYAYG ECIKDLDKKD CDLCFAQIKA 101: KVPRCLPFQK GTRGGQVFSD GCYIRYDDYN FYNETLSLQD RTVCAPKEIT GVNRTVFRDN AAELVKNMSV EAVRNGGFYA GFVDRHNVTV HGLAQCWETL 201: NRSGCVECLS KASVRIGSCL VNEEGRVLSA GCYMRFSTQK FYNNSGNSTS DGNGGHNHLG VILAVTSSVV AFVLLVSAAG FLLKKRHAKK QREKKQLGSL 301: FMLANKSNLC FSYENLERAT DYFSDKNKLG QGGSGSVYKG VLTNGKTVAV KRLFFNTKQW VDHFFNEVNL ISQVDHKNLV KLLGCSITGP ESLLVYEYIA 401: NQSLHDYLFV RKDVQPLNWA KRFKIILGTA EGMAYLHEES NLRIIHRDIK LSNILLEDDF TPRIADFGLA RLFPEDKTHI STAIAGTLGY MAPEYVVRGK 501: LTEKADVYSF GVLMIEVITG KRNNAFVQDA GSILQSVWSL YRTSNVEEAV DPILGDNFNK IEASRLLQIG LLCVQAAFDQ RPAMSVVVKM MKGSLEIHTP 601: TQPPFLNPGS VVEMRKMMMT PTTNQSNSSG SRSDYITEGS SFFEPR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)