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AT1G68500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.977
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25422.1); Has 16 Blast hits to 16 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J8IVeggNOG:ENOG411167REMBL:BT004035EMBL:BT005463
EMBL:CP002684EnsemblPlants:AT1G68500EnsemblPlants:AT1G68500.1entrez:843179
GeneID:843179Gramene:AT1G68500.1HOGENOM:HOG000147066KEGG:ath:AT1G68500
OMA:NIHNLTHPhylomeDB:Q84K42Proteomes:UP000006548RefSeq:NP_177017.2
STRING:3702.AT1G68500.1TAIR:AT1G68500UniGene:At.35514UniProt:Q84K42
Coordinates (TAIR10) chr1:+:25702041..25702322
Molecular Weight (calculated) 10355.80 Da
IEP (calculated) 3.94
GRAVY (calculated) -0.21
Length 93 amino acids
Sequence (TAIR10)
(BLAST)
1: MKRQRKDMEE EGTADDHSLA AAAMAVAVAA AAATAAEEEE QCWGGGVVEE ITWSSVWLPF WDVEFVGRNY GVLFNDVVWD DDIWNIHNLT HSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)