AT1G68160.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF3755) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF3755); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2); Has 154 Blast hits to 154 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 145; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25546168..25548625 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 30348.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.32 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.58 | ||||||||||||||||||||||||
| Length | 273 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWMATQSNSG FDSLSSMMSR HAINFQSNTS SEMTPMSPYL GMNMNMINVG SPGFLQTGNS SNGSDSGSGL KLDTSMVSEW SNEEQYILDA GLEKYKDMPS 101: IDMYIQIGNT LPDKSIRDIA LRCRWLRRKR RKSEELNCGR RASSSKGKQV ESSSKSSIPS VLPHNMASYP FSGPSTSTSK QITSEDLSSY ATNLIEQNVR 201: AFSQIRANLS SYKAGDNLDL FRQARNNLIT IQNEINNMPG LMNKMPPLPV TINDDLSVMM PFNTMQSGGF HRK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)