AT1G67410.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.782 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Exostosin family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Exostosin family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT1G74680.1); Has 1249 Blast hits to 1240 proteins in 88 species: Archae - 0; Bacteria - 6; Metazoa - 115; Fungi - 4; Plants - 1041; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25251606..25253568 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49758.60 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.18 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.36 | ||||||||||||||||||||||||||||
| Length | 430 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MYGKTICTIV FFIFLVASFS IYMGTVDPRP YFYLLQSQPN GASSPCSSSG KPLRVFMYDL PRKFNIAMMD PHSSDVEPIT GKNLPSWPQT SGIKRQHSVE 101: YWLMASLLNG GEDENEAIRV FDPDLADVFY VPFFSSLSFN THGKNMTDPD TEFDRLLQVE LMEFLENSKY WNRSGGKDHV IPMTHPNAFR FLRQQVNASI 201: LIVVDFGRYS KDMARLSKDV VSPYVHVVES LNEEGDDGMG DPFEARTTLL YFRGNTVRKD EGKIRLRLEK LLAGNSDVHF EKSVATTQNI KVSTEGMRSS 301: KFCLHPAGDT PSSCRLFDAI VSHCIPVIIS DKIELPFEDE IDYSEFSLFF SIKESLEPGY ILNNLRQFPK EKWLEMWKRL KNVSHHFEFQ YPPKREDAVN 401: MLWRQVKHKI PYVKLAVHRN RRLKVPDWWL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)