AT1G64630.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.996 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : with no lysine (K) kinase 10 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
with no lysine (K) kinase 10 (WNK10); FUNCTIONS IN: kinase activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 8 (TAIR:AT5G41990.1); Has 106075 Blast hits to 105172 proteins in 3001 species: Archae - 77; Bacteria - 10484; Metazoa - 38155; Fungi - 10128; Plants - 29410; Viruses - 406; Other Eukaryotes - 17415 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr1:+:24019920..24022114 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 59248.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.45 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 524 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MEEADFVQKD PTGRYIRYND VLGRGAFKTV YKAFDEVEGI EVAWNLMSIE DVLQMPGQLD RLYSEVHLLN SLKHDNIIKL FYSWVDDHNK SINMITELFT 101: SGSLTLYRKK HRKVDPKAIM NWARQILKGL HYLHSQTPPV IHRDLKCDNI FVNGNTGKVK IGDLGLAAVM QQPTARSVIG TPEFMAPELY EEEYNELVDI 201: YSFGMCMLEM VTCEYPYREC RNQAQIYKKV TSGIKPQSLS KVDDPQVKQF IEKCLLPAPS RPTALELLKD QLLAVDGAKD STLTASSNTT FKPAMPPQCE 301: YRPMDVEYKK NTSVSICSSA KSSQECALLQ TMEVQRVAES TEFKLSGERR DDVAASMALR IAGSSGQARK VDFDFNLKTD TARAVTGEMV EELDLSSHEV 401: TVIAEMIDEL IMKLKANRSL PNANSVYQSK DEEAGESMKS EISADYYHRV SSNEGSRLGC CCEAVESLLS SFLDSCSMVS NKQSEDLKTE LNVIESQYNQ 501: SCQRLLRMKE EAIEKAKRKW MKLS |
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)