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AT1G61667.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function, DUF538
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT5G54530.1); Has 441 Blast hits to 441 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J0XZeggNOG:ENOG410YN13EMBL:AK230247EMBL:BT029343
EMBL:CP002684EnsemblPlants:AT1G61667EnsemblPlants:AT1G61667.1entrez:842463
Gene3D:2.30.240.10GeneID:842463Gramene:AT1G61667.1hmmpanther:PTHR31676
hmmpanther:PTHR31676:SF28InterPro:IPR007493KEGG:ath:AT1G61667ncoils:Coil
OMA:KMDIQLKPfam:PF04398PhylomeDB:Q0WLF7Proteomes:UP000006548
RefSeq:NP_564783.1SMR:Q0WLF7SUPFAM:0051283SUPFAM:SSF141562
TAIR:AT1G61667UniGene:At.36402UniProt:Q0WLF7
Coordinates (TAIR10) chr1:+:22767674..22768269
Molecular Weight (calculated) 17385.20 Da
IEP (calculated) 4.76
GRAVY (calculated) 0.06
Length 156 amino acids
Sequence (TAIR10)
(BLAST)
001: MSMLLLLLLL VPFITPSSQS SIRNLLEARG LPGGLFPDNV ESYSLDDKTG ELEVQLQNPC FARFENRVYF DRVIKANLSY GGLVGLEGLT QEELFLWLPV
101: KGIAVNDPSS GLVLFDIGVA HKQISRSLFE DPPVCYPPGS IMEKLEKSKM DIQLKR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)