AT1G53420.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Leucine-rich repeat transmembrane protein kinase | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Leucine-rich repeat transmembrane protein kinase; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Malectin/receptor-like protein kinase (InterPro:IPR021720), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT3G14840.2); Has 186847 Blast hits to 131975 proteins in 4681 species: Archae - 122; Bacteria - 16717; Metazoa - 51381; Fungi - 10995; Plants - 85505; Viruses - 453; Other Eukaryotes - 21674 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:19926626..19931494 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 107496.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.87 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 953 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSLNRFLFTS FSFFLFFIVH FASSATLPTQ EGEAFKVVLT TLKKTNIDLN VDPCEVSSTG NEWSTISRNL KRENLQGSLP KELVGLPLLQ EIDLSRNYLN 101: GSIPPEWGVL PLVNIWLLGN RLTGPIPKEF GNITTLTSLV LEANQLSGEL PLELGNLPNI QQMILSSNNF NGEIPSTFAK LTTLRDFRVS DNQLSGTIPD 201: FIQKWTKLER LFIQASGLVG PIPIAIASLV ELKDLRISDL NGPESPFPQL RNIKKMETLI LRNCNLTGDL PDYLGKITSF KFLDLSFNKL SGAIPNTYIN 301: LRDGGYIYFT GNMLNGSVPD WMVNKGYKID LSYNNFSVDP TNAVCKYNNV LSCMRNYQCP KTFNALHINC GGDEMSINGT IYESDKYDRL ESWYESRNGW 401: FSNNVGVFVD DKHVPERVTI ESNSSELNVV DFGLYTQARI SAISLTYYAL CLENGNYNVN LHFAEIMFNG NNNYQSLGRR FFDIYIQRKL EVKDFNIAKE 501: AKDVGNVVIK TFPVEIKDGK LEIRLYWAGR GTTVIPKERV YGPLISAISV DSSVNPSPRN GMSTGTLHTL VVILSIFIVF LVFGTLWKKG YLRSKSQMEK 601: DFKSLELMIA SFSLRQIKIA TNNFDSANRI GEGGFGPVYK GKLFDGTIIA VKQLSTGSKQ GNREFLNEIG MISALHHPNL VKLYGCCVEG GQLLLVYEFV 701: ENNSLARALF GPQETQLRLD WPTRRKICIG VARGLAYLHE ESRLKIVHRD IKATNVLLDK QLNPKISDFG LAKLDEEDST HISTRIAGTF GYMAPEYAMR 801: GHLTDKADVY SFGIVALEIV HGRSNKIERS KNNTFYLIDW VEVLREKNNL LELVDPRLGS EYNREEAMTM IQIAIMCTSS EPCERPSMSE VVKMLEGKKM 901: VEVEKLEEAS VHRETKRLEN MNTMKKYYEM IGQEISTSMS MIMSDRSESS ADH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)