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AT1G52710.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Rubredoxin-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Rubredoxin-like superfamily protein; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial envelope; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit Vb (InterPro:IPR002124); BEST Arabidopsis thaliana protein match is: Rubredoxin-like superfamily protein (TAIR:AT3G15640.1); Has 289 Blast hits to 289 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 152; Fungi - 22; Plants - 78; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111XEMeggNOG:KOG3352EMBL:AC008016EMBL:AK119073
EMBL:BX841959EMBL:CP002684EnsemblPlants:AT1G52710EnsemblPlants:AT1G52710.1
entrez:841704Gene3D:2.60.11.10GeneID:841704Genevisible:Q9SSS5
GO:GO:0004129GO:GO:0005740GO:GO:0046872hmmpanther:PTHR10122
hmmpanther:PTHR10122:SF3InParanoid:Q9SSS5InterPro:IPR002124KEGG:ath:AT1G52710
OMA:KRNIGCRPANTHER:PTHR10122PaxDb:Q9SSS5Pfam:PF01215
Pfam:Q9SSS5Pfscan:PS51359PRO:PR:Q9SSS5ProDom:PD007270
PROSITE:PS51359ProteinModelPortal:Q9SSS5Proteomes:UP000006548RefSeq:NP_001185205.1
RefSeq:NP_175680.2SMR:Q9SSS5STRING:3702.AT1G52710.1SUPFAM:SSF57802
TAIR:AT1G52710UniGene:At.11638UniProt:Q9SSS5
Coordinates (TAIR10) chr1:-:19638627..19640112
Molecular Weight (calculated) 10300.70 Da
IEP (calculated) 4.89
GRAVY (calculated) -1.02
Length 90 amino acids
Sequence (TAIR10)
(BLAST)
1: MIRLDKEYSG RRLLDIDHPE SPFGTKESPA VVQSYFDKRN IGCRGGEGED GHDVVWFWLD KGKSFECPVC SQYFEHGPPD GHGDDEDHHH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)