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AT1G35340.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATP-dependent protease La (LON) domain protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); Has 216 Blast hits to 216 proteins in 83 species: Archae - 0; Bacteria - 95; Metazoa - 1; Fungi - 14; Plants - 53; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVPYeggNOG:ENOG410YD8QEMBL:AK175372EMBL:CP002684
EnsemblPlants:AT1G35340EnsemblPlants:AT1G35340.1entrez:840423ExpressionAtlas:Q682J5
GeneID:840423GO:GO:0004176GO:GO:0009507Gramene:AT1G35340.1
hmmpanther:PTHR23327hmmpanther:PTHR23327:SF13HOGENOM:HOG000029631InterPro:IPR003111
InterPro:IPR015947ncoils:CoilOMA:GCLVFIEPfam:PF02190
PhylomeDB:Q682J5Proteomes:UP000006548RefSeq:NP_174767.2SMART:SM00464
STRING:3702.AT1G35340.1SUPFAM:SSF88697TAIR:AT1G35340UniGene:At.43836
UniProt:Q682J5
Coordinates (TAIR10) chr1:+:12977768..12979749
Molecular Weight (calculated) 35321.80 Da
IEP (calculated) 7.66
GRAVY (calculated) -0.11
Length 316 amino acids
Sequence (TAIR10)
(BLAST)
001: MLFSTAELNG ESLNPITAIH IFPMTSTLIS SNLSSSFFPT QNIHRIRIPT TSIPGSFNIR ARRSKIVAKS LDLPLLPFSM SEVLVPTESK TLHLYEARYL
101: ALLEESMKRK KNMFVHFILD PISISETATE ASFAARYGCL VLIENVERLD VGALVSIRGA GRVKISRFLG ADPYLSGEVR PIQDRMNYES SNELTSKISQ
201: LKESIKNLNS LEIKLKAPAD SPLQTRLINS LNWAEDEPPV DFDESFVPSL QERLSFSAFQ PISGSTKSEL SRLQQEKIKA MDMKDTIERL ELSMGLIKEN
301: ISSIAAKLAI QSLDIR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)