AT1G32730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF702 (InterPro:IPR007818); Has 120 Blast hits to 118 proteins in 39 species: Archae - 0; Bacteria - 8; Metazoa - 63; Fungi - 4; Plants - 33; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:11841077..11842956 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 36335.10 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.77 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.75 | ||||||||||||||||||||||||
| Length | 327 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATSSPSLSN NGLSSVVTPP KTLRGLNKPK CIQCGNVARS RCPFQSCKGC CSRAENPCPI HVLKVASTSG EKTQAPSTPS SEQKATEGTP GSTTRVSSIR 101: QLSSNFAQFN NLNASSRQRK PLTIKDAQAL NEWRFTKLKE YRDRNIEVEN EAFDRYMSNV NLLEEAFSFT SVPDEESHGT AAPEQNKEEN IVSELKLRLR 201: SNSARTESFK KRIAETVKAG LVKLKRLDLG SSSDDQDDIK RRVKRKKWEE KGSALNEIID KLNKARTEED LKSCLEMKSK LCGQVSPTAA SEKNKIFPGV 301: VRKVEMSEEA LQKIAENLQS FDKVGML |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)