AT1G19990.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11600.1); Has 11256 Blast hits to 7192 proteins in 541 species: Archae - 6; Bacteria - 629; Metazoa - 4714; Fungi - 936; Plants - 545; Viruses - 34; Other Eukaryotes - 4392 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:6935327..6936665 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 28237.30 Da | ||||||||||||||||||||||||
| IEP (calculated) | 10.41 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.52 | ||||||||||||||||||||||||
| Length | 251 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPPSEDVKAM KMKEEAEEDN KSLSSFAKKK PTNGNNAGSK KLKKEENDDD DDDNKPIKSS VSGSRAKPVK KKEEIDKDDE KKPVSKRNSS VGVSKENKKP 101: EKEEEVKKKR ERKVYDLPGQ KREQPDERDP LRIFYESLYK QIPTSDMAQI WLMESGLLPA EKAKKVLEKK LQKGGKLSSP VKSAASTPRS NSKSVTVKKK 201: EVQKSPSEAL SNKKKGNDSK PTTKKRKKNS DDDDSDDDFL ASRVSKKARA K |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)