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AT1G29810.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Transcriptional coactivator/pterin dehydratase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Transcriptional coactivator/pterin dehydratase; FUNCTIONS IN: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity, dihydroxy-acid dehydratase activity; INVOLVED IN: tetrahydrobiopterin biosynthetic process; CONTAINS InterPro DOMAIN/s: Transcriptional coactivator/pterin dehydratase (InterPro:IPR001533); BEST Arabidopsis thaliana protein match is: Transcriptional coactivator/pterin dehydratase (TAIR:AT5G51110.1); Has 4058 Blast hits to 4056 proteins in 962 species: Archae - 80; Bacteria - 1882; Metazoa - 205; Fungi - 16; Plants - 92; Viruses - 0; Other Eukaryotes - 1783 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2154eggNOG:KOG4073EMBL:AY536641EMBL:CP002684
EnsemblPlants:AT1G29810EnsemblPlants:AT1G29810.1entrez:839859Gene3D:3.30.1360.20
GeneID:839859GO:GO:0006729GO:GO:0008124Gramene:AT1G29810.1
hmmpanther:PTHR12599hmmpanther:PTHR12599:SF2HOGENOM:HOG000007681InterPro:IPR001533
KEGG:ath:AT1G29810OMA:CNSKDLHPANTHER:PTHR12599Pfam:PF01329
PhylomeDB:Q6QJ72Proteomes:UP000006548RefSeq:NP_174274.2SMR:Q6QJ72
STRING:3702.AT1G29810.1SUPFAM:SSF55248TAIR:AT1G29810UniGene:At.40661
UniGene:At.64003UniProt:Q6QJ72
Coordinates (TAIR10) chr1:-:10435606..10437406
Molecular Weight (calculated) 21064.30 Da
IEP (calculated) 10.37
GRAVY (calculated) -0.37
Length 187 amino acids
Sequence (TAIR10)
(BLAST)
001: MSRLLLPKLF SISRTQVPAA SLFNNLYRRH KRFVHWTSKM STDSVRSSTT GGSASGARTF CSLADLSTKK CVPCNAKDLR AMTEQSAQDL LQKVAGWDLA
101: NDNDTLKLHR SWRVKSFTKG LDFFQRVADI AESEGHHPDL HLVGWNNVKI EIWTHAIGGL TENDFILAAK INELQVEDLL RKKKVAK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)