AT1G29300.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant protein of unknown function (DUF641) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unfertilized embryo sac 1 (UNE1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT3G14870.3); Has 320 Blast hits to 319 proteins in 42 species: Archae - 0; Bacteria - 33; Metazoa - 5; Fungi - 2; Plants - 274; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:10248120..10249499 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51429.60 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.19 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||
| Length | 459 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METLKKNPSV RRKSKLARTF QKVCNLRTTS TKVSSNNGIG ICMLKSQNPN FDDEDDDGDS VFDLKSTSSS RSGEIKVRER NRAVLQAVVA KIFASTTSIK 101: AAYAELQMAQ RPYDNDAIQA ADTAVVEELR ALSELKRSFL RKELNLSPQV AIMLAEIQEQ QSLMRTYEIT IKKLEFEVTE KQLKIDELKM SFEESLVVNK 201: SLEKKLSASG SVSVFDNIEI RNLNLSSFVQ VLGFTLRSVR SFVKLIVKEM ESASWDLDAA ASAAVSVNVK NASTVFARPS HRCFAFESFV CGKMFENFGA 301: PDFSRREEFE KLRSVDPIQY LTRNPGSSFA RFVVHKYLSV VHAKMECSFF GNLNQRKLVN SGGFPDSGFF ATFCEMAKRI WLLHCLAFSL SGNVTVFQLK 401: RGCRFSQVYM ESVKSGDESL FSGDNSDIRV GFTVVPGFKI GENVIQSQVY LTPVNGFTS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)