suba logo
AT1G24735.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: stem, leaf apex, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: caffeoyl-CoA 3-O-methyltransferase (TAIR:AT1G67980.1); Has 876 Blast hits to 876 proteins in 343 species: Archae - 8; Bacteria - 665; Metazoa - 15; Fungi - 24; Plants - 105; Viruses - 0; Other Eukaryotes - 59 (source: NCBI BLink).
Protein Annotations
EMBL:CP002684EnsemblPlants:AT1G24735EnsemblPlants:AT1G24735.1entrez:839082
ExpressionAtlas:F4IAT5Gene3D:3.40.50.150GeneID:839082GO:GO:0008171
Gramene:AT1G24735.1gramene_pathway:2.1.1.104gramene_pathway:PWY-1121gramene_pathway:PWY-361
gramene_pathway:PWY4FS-9hmmpanther:PTHR10509hmmpanther:PTHR10509:SF20InterPro:IPR002935
InterPro:IPR029063Pfam:PF01596Pfscan:PS51682PRIDE:F4IAT5
PROSITE:PS51682ProteinModelPortal:F4IAT5Proteomes:UP000006548RefSeq:NP_173872.4
SMR:F4IAT5SUPFAM:SSF53335TAIR:AT1G24735UniGene:At.51756
UniProt:F4IAT5
Coordinates (TAIR10) chr1:+:8757977..8759448
Molecular Weight (calculated) 27027.00 Da
IEP (calculated) 6.86
GRAVY (calculated) -0.18
Length 240 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKLLPPSKL LPPKGILKSD ALKKYIFETT AYPREHEQLK KLREATVLKY GNLSEMEVPV DEGHFLSMLL KIMNAKKTIE LGVFTGYSLL TTALALPHDG
101: HVTGIDIDKE AYEMGLEFIK NAGVHHKINF IHSDCLQALD NMLSENPKPE FDFAFVDADK PNYANMHERL MKLVKVGGVI AFDNTLWSGF VAEKEENVPV
201: HMRVNRKAFL DLNKRLAADP HVEVSQVSIG DGVTLCRRLV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)