AT1G22620.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:golgi 1.000 ASURE: golgi What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Phosphoinositide phosphatase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
SAC domain phosphoinositide (3,5)P2 phosphatase. Colocalized with a Golgi Marker. Required for normal cell morphogenesis, cell wall synthesis, and actin organization. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
suppressor of actin 1 (ATSAC1); CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT3G14205.1); Has 2374 Blast hits to 1664 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 925; Fungi - 777; Plants - 320; Viruses - 0; Other Eukaryotes - 352 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:7997889..8002787 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 102817.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.57 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.50 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 912 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAKSENSTTS TFSSFANKIQ PSNDAESDPD SYALEKFKLY ETRARFYLVG SDRNKRFFRV LKIDRSEPSE LNISEDPVVY SPQEIKSLLQ RIAEGNRATG 101: GLAFVAKVYG IAGCAKFMES YYLVLVTKRR QIGCICGHAI YAIDESQMIS VPHATIQSDV ANSKTELRYK KLLSSVDLTK DFFYSYTYPI MQSLQKNVLS 201: SGEEGMPYDN IFVWNSYLTQ PIRSRCNNTI WTLALVHGHF KQIRLSIYGR DFSVTLVSRR SRHFAGTRYL KRGVNDRGRV ANDVETEQLV LDDEAGSCKG 301: KMSSVVQMRG SIPLFWSQEA SRFSPKPDIF LQRYDPTYES TKMHFEDLVN RYGNPIIVLN LIKTVEKRPR EMVLRREFAN AVGYLNSIFR EENHLKFIHW 401: DFHKFAKSKS ANVLAVLGAV ASEALDLTGL YFSGKPKIVK KKASQLSHAN TAREPSLRDL RAYSAELSRG ESANDILSAL ANREKEMKLT QQKKDEGTNS 501: SAPRYQSGVL RTNCIDCLDR TNVAQYAYGL AALGRQLHAM GLSDTPKIDP DSSIAAALMD MYQSMGDALA QQYGGSAAHN TVFPERQGKW KATTQSREFL 601: KSIKRYYSNT YTDGEKQDAI NLFLGYFQPQ EGKPALWELD SDYYLHVSGI GDDIFPDIGV QSIAKPMSGI GVNLAPVPAF RDDFSRKKLT SFDKLIEQTC 701: SSIKNVRLCS ETDQRPGGNT GSTGVAPDAA EIQLKSPNWL FGSRKPEESS SATKSGADDS EKGVTSTERV NDFCNLDWLS KSDRHQGDIF QRYLSITSTN 801: EANGWYGGTL LGDQDENSEI YRHYAQFCQC PAMEPFENDH EFEQNFAEVL RMNTIDVMDI EEEETEMESD FNEYTQIGSD LGIIPMQCKH FASDPCWLAR 901: WLVGDDKVPK VI |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)