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AT1G22170.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoglycerate mutase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoglycerate mutase family protein; FUNCTIONS IN: intramolecular transferase activity, phosphotransferases, catalytic activity; INVOLVED IN: glycolysis, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345), Phosphoglycerate mutase 1 (InterPro:IPR005952); BEST Arabidopsis thaliana protein match is: phosphoglycerate/bisphosphoglycerate mutase (TAIR:AT1G78050.1); Has 12525 Blast hits to 12398 proteins in 2288 species: Archae - 62; Bacteria - 8805; Metazoa - 605; Fungi - 308; Plants - 169; Viruses - 0; Other Eukaryotes - 2576 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G22170-MONOMEReggNOG:COG0588eggNOG:KOG0235EMBL:AC073942
EMBL:BT020337EMBL:CP002684EnsemblPlants:AT1G22170EnsemblPlants:AT1G22170.1
entrez:838822Gene3D:3.40.50.1240GeneID:838822GO:GO:0004619
GO:GO:0006096Gramene:AT1G22170.1gramene_pathway:5.4.2.1gramene_pathway:GLYCOLYSIS
gramene_pathway:PWY-1042gramene_pathway:PWY-5723gramene_pathway:PWYQT-4428HAMAP:MF_01039
hmmpanther:PTHR11931hmmpanther:PTHR11931:SF6InterPro:IPR001345InterPro:IPR005952
InterPro:IPR013078InterPro:IPR029033KEGG:00010+5.4.2.11KEGG:00260+5.4.2.11
KEGG:00680+5.4.2.11KEGG:ath:AT1G22170KO:K01834OMA:IIHEESE
PANTHER:PTHR11931Pfam:PF00300PhylomeDB:Q9LM13PIR:C86354
PROSITE:PS00175Proteomes:UP000006548Reactome:R-ATH-70171Reactome:R-ATH-70263
RefSeq:NP_564161.1scanprosite:PS00175SMART:SM00855SMR:Q9LM13
STRING:3702.AT1G22170.1SUPFAM:SSF53254TAIR:AT1G22170UniGene:At.41618
UniGene:At.43225unipathway:UPA00109UniProt:Q9LM13
Coordinates (TAIR10) chr1:+:7826603..7828055
Molecular Weight (calculated) 37296.70 Da
IEP (calculated) 8.34
GRAVY (calculated) -0.35
Length 334 amino acids
Sequence (TAIR10)
(BLAST)
001: MATATSHQSV VSFASLRSSP SSTISQCGFK IDSSLSFTSK KTNFCKIKAM ASSVSYDNTL LSPSKTIPDN SQKKSNEAAL ILIRHGESLW NEKNLFTGCV
101: DVPLTEKGVE EAIEAGKRIS NIPVDVIFTS SLIRAQMTAM LAMIQHRRKK VPIILHDESE QAKTWSQVFS DETKNQSIPV IPAWQLNERM YGELQGLNKQ
201: ETAERYGKEQ VHEWRRSYDI PPPKGESLEM CAERAVAYFQ DNIEPKLAAG KNVMIAAHGN SLRSIIMYLD KLTCQEVISL ELSTGIPLLY IFKEGKFMKR
301: GSPVGPTEAG VYAYTKRLAQ YRQKLEDDSE VLCA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)