AT1G21640.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : NAD kinase 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
NAD kinase 2 (NADK2); FUNCTIONS IN: NAD+ kinase activity, calmodulin binding; INVOLVED IN: pyridine nucleotide biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type, alpha/beta (InterPro:IPR017438), ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 1 (TAIR:AT3G21070.2); Has 8697 Blast hits to 8591 proteins in 2758 species: Archae - 277; Bacteria - 5531; Metazoa - 247; Fungi - 416; Plants - 137; Viruses - 0; Other Eukaryotes - 2089 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:7588726..7592669 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 109194.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.60 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.35 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 985 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MFLCFCPCHV PIMSRLSPAT GISSRLRFSI GLSSDGRLIP FGFRFRRNDV PFKRRLRFVI RAQLSEAFSP DLGLDSQAVK SRDTSNLPWI GPVPGDIAEV 101: EAYCRIFRSA ERLHGALMET LCNPVTGECR VPYDFSPEEK PLLEDKIVSV LGCILSLLNK GRKEILSGRS SSMNSFNLDD VGVAEESLPP LAVFRGEMKR 201: CCESLHIALE NYLTPDDERS GIVWRKLQKL KNVCYDAGFP RSDNYPCQTL FANWDPIYSS NTKEDIDSYE SEIAFWRGGQ VTQEGLKWLI ENGFKTIVDL 301: RAEIVKDTFY QTALDDAISL GKITVVQIPI DVRMAPKAEQ VELFASIVSD SSKRPIYVHS KEGVWRTSAM VSRWKQYMTR PITKEIPVSE ESKRREVSET 401: KLGSNAVVSG KGVPDEQTDK VSEINEVDSR SASSQSKESG RFEGDTSASE FNMVSDPLKS QVPPGNIFSR KEMSKFLKSK SIAPAGYLTN PSKILGTVPT 501: PQFSYTGVTN GNQIVDKDSI RRLAETGNSN GTLLPTSSQS LDFGNGKFSN GNVHASDNTN KSISDNRGNG FSAAPIAVPP SDNLSRAVGS HSVRESQTQR 601: NNSGSSSDSS DDEAGAIEGN MCASATGVVR VQSRKKAEMF LVRTDGVSCT REKVTESSLA FTHPSTQQQM LLWKTTPKTV LLLKKLGQEL MEEAKEAASF 701: LYHQENMNVL VEPEVHDVFA RIPGFGFVQT FYIQDTSDLH ERVDFVACLG GDGVILHASN LFKGAVPPVV SFNLGSLGFL TSHPFEDFRQ DLKRVIHGNN 801: TLDGVYITLR MRLRCEIYRK GKAMPGKVFD VLNEIVVDRG SNPYLSKIEC YEHDRLITKV QGDGVIVATP TGSTAYSTAA GGSMVHPNVP CMLFTPICPH 901: SLSFRPVILP DSAKLELKIP DDARSNAWVS FDGKRRQQLS RGDSVRIYMS QHPLPTVNKS DQTGDWFRSL IRCLNWNERL DQKAL |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)