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AT1G21100.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.695
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : O-methyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; EXPRESSED IN: stem, cotyledon, hypocotyl, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G21130.1); Has 3375 Blast hits to 3370 proteins in 588 species: Archae - 3; Bacteria - 947; Metazoa - 107; Fungi - 659; Plants - 1542; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G21100-MONOMEREC:2.1.1.-eggNOG:ENOG410XS7TeggNOG:KOG3178
EMBL:AC012190EMBL:AF344316EMBL:AY057529EMBL:AY143974
EMBL:CP002684EnsemblPlants:AT1G21100EnsemblPlants:AT1G21100.1entrez:838706
Gene3D:1.10.10.10Gene3D:3.40.50.150GeneID:838706GO:GO:0008168
GO:GO:0008171GO:GO:0008757GO:GO:0019438GO:GO:0042343
Gramene:AT1G21100.1gramene_pathway:1.1.1.-gramene_pathway:2.1.1.-gramene_pathway:PWY-601
gramene_pathway:PWYQT-4477hmmpanther:PTHR11746hmmpanther:PTHR11746:SF63HOGENOM:HOG000238276
InterPro:IPR001077InterPro:IPR011991InterPro:IPR012967InterPro:IPR016461
InterPro:IPR029063KEGG:ath:AT1G21100OMA:DEAMANHPaxDb:Q9LPU5
Pfam:PF00891Pfam:PF08100Pfscan:PS51683PhylomeDB:Q9LPU5
PIR:B86344PIRSF:PIRSF005739PROSITE:PS51683ProteinModelPortal:Q9LPU5
Proteomes:UP000006548Reactome:R-ATH-209931RefSeq:NP_173534.1SMR:Q9LPU5
STRING:3702.AT1G21100.1SUPFAM:SSF46785SUPFAM:SSF53335TAIR:AT1G21100
UniGene:At.20490UniGene:At.70478UniProt:Q9LPU5
Coordinates (TAIR10) chr1:-:7386991..7388318
Molecular Weight (calculated) 40871.40 Da
IEP (calculated) 5.01
GRAVY (calculated) 0.08
Length 373 amino acids
Sequence (TAIR10)
(BLAST)
001: MGYLFQETLS SNPKTPIVVD DDNELGLMAV RLANAAAFPM VLKAALELGV FDTLYAAASR TDSFLSPYEI ASKLPTTPRN PEAPVLLDRM LRLLASYSMV
101: KCGKALSGKG ERVYRAEPIC RFFLKDNIQD IGSLASQVIV NFDSVFLNTW AQLKDVVLEG GDAFGRAHGG MKLFDYMGTD ERFSKLFNQT GFTIAVVKKA
201: LEVYEGFKGV KVLVDVGGGV GNTLGVVTSK YPNIKGINFD LTCALAQAPS YPGVEHVAGD MFVDVPTGDA MILKRILHDW TDEDCVKILK NCWKSLPENG
301: KVVVIELVTP DEAENGDINA NIAFDMDMLM FTQCSGGKER SRAEFEALAA ASGFTHCKFV CQAYHCWIIE FCK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)