AT1G19490.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Basic-leucine zipper (bZIP) transcription factor family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper transcription factor 16 (TAIR:AT2G35530.1); Has 967 Blast hits to 951 proteins in 159 species: Archae - 2; Bacteria - 7; Metazoa - 181; Fungi - 81; Plants - 591; Viruses - 1; Other Eukaryotes - 104 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:6751953..6753959 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52635.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.68 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.88 | ||||||||||||||||||||||||||||||||
| Length | 471 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MELEPISSSC CSSSSSSSGE ENTAAANMTE MEAAEALADL AQLAIMREQV FESAASWGSK GKRVRKRVKT ESPPSDSLLK PPDSDTLPTP DLAEERLVKE 101: EEEEEEVEPI TKELTKAPVK SEINGETPKP ILASTLIRCS RSNGCGRSRQ NLSEAEREER RIRRILANRE SARQTIRRRQ AMCEELSKKA ADLTYENENL 201: RREKDWALKE FQSLETINKH LKEQVLKSVK PDTKEPEESP KPSQVEMSTS STPFYFYNQN PYQLFCWPHV TQSSNPMISP LEFPTSGGAS AKTITTQEHE 301: NAADDNGQKT HFYVVPCPWF LPPPDHSNGV PFGLQDTQRG TFSNGHHIDD SSARPMDVTE TPRSHLPTRI KEEDSGSPET RPLYDLNESA TEVLSEGGDG 401: FPVTQQAYSL KHEDVSETTN GVTLMPPGHH VLISLPEKKH GSLAAAEARK RRKELTRLKN LHGRQCRMQV G |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)