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AT1G19190.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G03550.1); Has 9471 Blast hits to 9453 proteins in 1548 species: Archae - 114; Bacteria - 5498; Metazoa - 707; Fungi - 823; Plants - 1388; Viruses - 3; Other Eukaryotes - 938 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G19190-MONOMEREC:3.1.1.1eggNOG:COG0657eggNOG:KOG1515
EMBL:AC069143EMBL:BT004093EMBL:BT029511EMBL:CP002684
EnsemblPlants:AT1G19190EnsemblPlants:AT1G19190.1entrez:838502ESTHER:arath-CXE1
Gene3D:3.40.50.1820GeneID:838502Genevisible:Q9LMA7GO:GO:0052689
Gramene:AT1G19190.1hmmpanther:PTHR23024hmmpanther:PTHR23024:SF186HOGENOM:HOG000152317
InParanoid:Q9LMA7InterPro:IPR013094InterPro:IPR029058InterPro:IPR033140
iPTMnet:Q9LMA7KEGG:ath:AT1G19190MEROPS:S09.A09OMA:QWIFTHI
PaxDb:Q9LMA7Pfam:PF07859Pfam:Q9LMA7PhylomeDB:Q9LMA7
PIR:D86325PRIDE:Q9LMA7PRO:PR:Q9LMA7PROSITE:PS01174
ProteinModelPortal:Q9LMA7Proteomes:UP000006548RefSeq:NP_173353.1scanprosite:PS01174
SMR:Q9LMA7STRING:3702.AT1G19190.1SUPFAM:SSF53474TAIR:AT1G19190
UniGene:At.43539UniProt:Q9LMA7
Coordinates (TAIR10) chr1:+:6623876..6624832
Molecular Weight (calculated) 36083.00 Da
IEP (calculated) 5.43
GRAVY (calculated) -0.24
Length 318 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)