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AT1G18490.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:27943495 (2017): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF1637)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT5G39890.1); Has 360 Blast hits to 360 proteins in 93 species: Archae - 0; Bacteria - 0; Metazoa - 102; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Protein Annotations
EC:1.13.11.20eggNOG:ENOG4111Y3HeggNOG:KOG4281EMBL:AC013354
EMBL:AY054655EMBL:AY072501EMBL:AY088754EMBL:CP002684
EMBL:DQ487488EnsemblPlants:AT1G18490EnsemblPlants:AT1G18490.1entrez:838430
Gene3D:2.60.120.10GeneID:838430Genevisible:Q1G3U6GO:GO:0005634
GO:GO:0005737GO:GO:0009061GO:GO:0017172GO:GO:0018171
GO:GO:0046872GO:GO:0070483hmmpanther:PTHR22966HOGENOM:HOG000240285
IntAct:Q1G3U6InterPro:IPR011051InterPro:IPR012864InterPro:IPR014710
KEGG:ath:AT1G18490KO:K10712OMA:DWIEPTVPaxDb:Q1G3U6
Pfam:PF07847Pfam:Q1G3U6PhylomeDB:Q1G3U6PRIDE:Q1G3U6
PRO:PR:Q1G3U6ProteinModelPortal:Q1G3U6Proteomes:UP000006548RefSeq:NP_564055.1
STRING:3702.AT1G18490.1SUPFAM:SSF51182TAIR:AT1G18490UniGene:At.1490
UniGene:At.74320UniProt:Q1G3U6
Coordinates (TAIR10) chr1:+:6367116..6368640
Molecular Weight (calculated) 31292.50 Da
IEP (calculated) 5.65
GRAVY (calculated) -0.19
Length 282 amino acids
Sequence (TAIR10)
(BLAST)
001: MLSRLFKAGE KVLSNLVSKK DIYMASRNQE KSPKVQELYD LCKETFTGKA PSPASMAIQK LCSVLDSVSP ADVGLEEVSQ DDDRGYGVSG VSRFNRVGRW
101: AQPITFLDIH ECDTFTMCIF CFPTSSVIPL HDHPEMAVFS KILYGSLHVK AYDWVEPPCI ITQDKGVPGS LPARLAKLVS DKVITPQSEI PALYPKTGGN
201: LHCFTALTPC AVLDILSPPY KESVGRSCSY YMDYPFSTFA LENGMKKVDE GKEDEYAWLV QIDTPDDLHM RPGSYTGPTI RV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)