AT1G15130.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Endosomal targeting BRO1-like domain-containing protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Endosomal targeting BRO1-like domain-containing protein; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); Has 26948 Blast hits to 15985 proteins in 1003 species: Archae - 32; Bacteria - 2662; Metazoa - 9770; Fungi - 4642; Plants - 6039; Viruses - 612; Other Eukaryotes - 3191 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:5206217..5209848 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 95214.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.41 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.58 | ||||||||||||||||||||||||||||||||||||||||
| Length | 846 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASSSLSNLM LAIHEKKTSS VDLYRPLRNY VTFTYSEREA QLIDDDLETL KQLRSDIERV SDPSPAARRD LLISYYKVLC LVETRFPISP DKDHVNAVSF 101: VWYDAFKQKH KATQQNIHLE KAAVLFNLGA SYSQIGLGHD RTTVDGRRQA SHAFMAAAGA FAHLRDNESI KATIGPSTTV DVSVECVGML ERLMVAQAQE 201: CVFENTIAKG STPGVSAKIA RQVGIFYEEA LSALIISPLK DHFDKGWISH VQLKAALFYG EACFRYGKEL HEKEEIAEEI ARLRSGASRL AEAKKSSRGA 301: PAQLIEAMNT LESSINGNLD RAVKENDRVY LMRVPSPSSL SPLPAFSMVK PMNMTDILDA SKEKMFSILV PDSSAKALSR YTEMVDDVIR TQAERLQQAS 401: ELTRVRLKEM DLPDSILAVD GNSALPVDLK EDVEAVQISG GPAGLEAELQ QLRDLKRVNQ ELLVHTEELL QKEATEDSQF RSQFGTRWTR PQSSTLTKNL 501: QDRLNRFAAN LKQAGESDVK IERSVRDNSA LMSILDRRPI ESAVPTLARP IMSLDATEDA IVGTLKQSLR QLENLGAQRA GLEDMLKEMK RKDDILPKLM 601: TITGSYEDMF RKEISKYDHI CEDISQNIEV QEQLLMQIQA QNEEFSTIFN LEDYKASKEK CYKQIQAAIM KYREIKENIN EGLKFYVTLQ DAITNVKQQC 701: SDFVMTRSIQ CRDMIEDVQR QMSGLSFQDH RSSGPYPSVH QPTASSPPPP PETQNPSHPH PHAPYYRPPE QMSRPGYSIP PYGPPPPYHT PHGQAPQPYP 801: PQAQQQPHPS WQQGSYYDPQ GQQPRPPYPG QSPYQPPHQG GGYYRQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)