AT1G14300.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ARM repeat superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0507 (InterPro:IPR007205), Armadillo-like helical (InterPro:IPR011989), Uncharacterised protein family UPF0507, C-terminal (InterPro:IPR007206), Armadillo-type fold (InterPro:IPR016024); Has 331 Blast hits to 331 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 149; Plants - 51; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:4882654..4884686 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37687.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.66 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||
| Length | 339 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVTELEELVE FLSSPSPPVK KAAVEIVSGL TGSEEGLQSL SKYSEILLPS LSQLLNESKE VSEPAAQALV NLSQKCELAK KMIQMGLIKV AMDMLYKPES 101: CITRLLVMLL VNLTQLDDGV SSLLQIDDEK MHGLHIMKLV RSFCRSSGET ADDQFEHVGS ILVNISKTED GRKLLLEPKR RLLKQIIRQF DSTNQLRKKG 201: VAGTIRNCCF EAKNQLQNIL LISEFLWPAL LLPVAGSKTY SEQDVAKMPP ELGSALSIER EPVTDPDIRV QTLEAIYLII LEEAGRRAFW SVNGPRILQL 301: GYEYEEDPKA MRAYEQVGSL LVEEAGGPEE SLEPTKAES |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)