AT1G09575.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF607) | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF607); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT1G57610.2); Has 384 Blast hits to 384 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 56; Plants - 127; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:3101851..3102832 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 33805.20 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.15 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||||||
| Length | 292 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MWSMGLIRRT AMSNAIRASS QRTWLGHGGL RSCVTVKTPS EDEEEKKKEI TIAEAKKLMR LVNVEDMKKK LVGVADRDVV SYSTLLEASQ GMGIARSPDE 101: AHVFARVLDD AGVVLIFRDK VYLHPDKVVD LIRRAMPLDQ NPEEDQIKEE FNKLRIMKEE IDVLAHRQVR KILWCGLATS MVQIGLFFRL TFWEFSWDVM 201: EPITFFATAT GIIVGYAYFL MTSRDPTYQD FMKRLFLSRQ RKLLKSHKFD CERFKELERL FKMTSSCHAA ASIRNRVGLE LDLEDALQSR RD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)