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AT1G02660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.921
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G62590.1); Has 747 Blast hits to 737 proteins in 148 species: Archae - 0; Bacteria - 27; Metazoa - 209; Fungi - 146; Plants - 175; Viruses - 15; Other Eukaryotes - 175 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIK5eggNOG:ENOG410ZUTCEMBL:CP002684EnsemblPlants:AT1G02660
EnsemblPlants:AT1G02660.1entrez:839544Gene3D:3.40.50.1820GeneID:839544
GO:GO:0006629GO:GO:0016021GO:GO:0016787Gramene:AT1G02660.1
hmmpanther:PTHR21493hmmpanther:PTHR21493:SF117InParanoid:F4HXL0InterPro:IPR002921
InterPro:IPR029058KEGG:ath:AT1G02660ncoils:CoilOMA:VQRDHDM
PaxDb:F4HXL0Pfam:PF01764ProteinModelPortal:F4HXL0Proteomes:UP000006548
RefSeq:NP_563660.1SMR:F4HXL0STRING:3702.AT1G02660.1SUPFAM:SSF53474
TAIR:AT1G02660TMHMM:TMhelixUniGene:At.26191UniProt:F4HXL0
Coordinates (TAIR10) chr1:-:572187..574746
Molecular Weight (calculated) 78350.30 Da
IEP (calculated) 4.96
GRAVY (calculated) -0.31
Length 713 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSLCLNSGL HGVIPAITAV GNGGCGGVVE VRATASAPSQ KRGPFGFSFK YPLTPFWSRG GGGGIASRRR SGLCLDDAVL VDSGDSRKPI AEETAVEMDT
101: ERRNGSWVLK ILDVQSTWKH EEEEDDDEVE DEDGDEDEEV ELDDAVVSED DGGCDVCSVL EDDGNEANKF QLDRESFSKL LRRVTLPESK LYAQLSYLGN
201: LAYSISKIKP ANLSKYYGLR FVTSSAEKTE SALKAENGEV SGETKPIVEA EEEVEEEEKN KSRKISASAA YEIVASAASY LHSRTNNILP FNSSSKAENS
301: DKHDVNLTNA ESSSDVAYSV TSVVAAEEDV KQAVADDLKS TISSPCDWFI CDDDQSHTRF VVIQGSESLA SWQANLLFEP IEFEGLGAIV HRGIYEAAKG
401: MYEQMLPEVK AHIKTHGTSA KFRFTGHSLG GSLSLLLNLM LLVRGEVPAS SLLPVITYGA PFVLCGGDRL LKKLGLPKSH VQAIVMHRDI VPRAFSCNYP
501: YHVAELLKAV NGNFRSHPCL NKQSMLYSPM GELLILQPDE TFSPGHELLP SGNGLYLLTS DFESPDIEDS DEERLRAAQT VFLNTPHPLD ILSDRSAYGS
601: SGTIQRDHDM NSYLKAVRSV IRKEVNQIRR AKREHRRSLW WPILVARESG SSGIAVSNGQ INGQDFSGMM QTGRKSLQRF SRLVASQHMP LIVVMLFPVK
701: LLFLGAFNVF SFR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)