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AT1G09480.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.965
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: alcohol dehydrogenase (NAD) activity, cinnamyl-alcohol dehydrogenase activity; INVOLVED IN: lignin biosynthetic process, cellular metabolic process, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G09490.1); Has 11337 Blast hits to 11295 proteins in 1830 species: Archae - 188; Bacteria - 4702; Metazoa - 514; Fungi - 973; Plants - 2502; Viruses - 52; Other Eukaryotes - 2406 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0451eggNOG:KOG1502EMBL:CP002684EnsemblPlants:AT1G09480
EnsemblPlants:AT1G09480.1entrez:837471Gene3D:3.40.50.720GeneID:837471
GO:GO:0004022GO:GO:0050662GO:GO:0055114Gramene:AT1G09480.1
hmmpanther:PTHR10366hmmpanther:PTHR10366:SF362InParanoid:F4I0Z5InterPro:IPR001509
InterPro:IPR016040iPTMnet:F4I0Z5KEGG:ath:AT1G09480OMA:MEGINCK
PaxDb:F4I0Z5Pfam:PF01370PRIDE:F4I0Z5ProteinModelPortal:F4I0Z5
Proteomes:UP000006548RefSeq:NP_172419.1SMR:F4I0Z5STRING:3702.AT1G09480.1
SUPFAM:SSF51735TAIR:AT1G09480UniGene:At.51537UniProt:F4I0Z5
Coordinates (TAIR10) chr1:+:3057975..3060661
Molecular Weight (calculated) 41280.20 Da
IEP (calculated) 4.91
GRAVY (calculated) 0.02
Length 369 amino acids
Sequence (TAIR10)
(BLAST)
001: MMHEMAYKVC VEKVKSLGIE FTTPIEETLR DTIVSLMEDY KERSKEIMNG GGKLVCVTGA SGYIASWIVK LLLLRGYTVK ATVRDLTDRK KTEHLLALDG
101: AKERLKLFKA DLLEESSFEQ AIEGCDAVFH TASPVFFTVK DPQTELIDPA LKGTMNVLNT CKETPSVRRV ILTSSTAAVL FRQPPVEASD VVDETFFSDP
201: SLCRETKNWY PLSKILAENA AWEFAKDNGI DMVVLNPGFI FGPLLQPTLN FSVELIVDFI NGKNPFNSRF YRFVDVRDVA LAHIKALETP SANGRYIIDG
301: PIMSVSDIID ILRELLPDLC IADTNEESVM NEMLCKVCVE KVKNLGVEFT PMKSSLRDTI VSLKEKCLL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)