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AT1G06770.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : DREB2A-interacting protein 1
Curator
Summary (TAIR10)
Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. The DRIP1-GFP fusion protein is nuclear-localized. DRIP1 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.
Computational
Description (TAIR10)
DREB2A-interacting protein 1 (DRIP1); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: DREB2A-interacting protein 2 (TAIR:AT2G30580.1); Has 2055 Blast hits to 2008 proteins in 210 species: Archae - 0; Bacteria - 27; Metazoa - 1318; Fungi - 145; Plants - 309; Viruses - 2; Other Eukaryotes - 254 (source: NCBI BLink).
Protein Annotations
BioGrid:22429EC:6.3.2.-eggNOG:ENOG410XPCNeggNOG:KOG2660
EMBL:AC011001EMBL:BT033132EMBL:BX815334EMBL:CP002684
EnsemblPlants:AT1G06770EnsemblPlants:AT1G06770.1entrez:837188Gene3D:3.30.40.10
GeneID:837188Genevisible:Q9M9Y4GO:GO:0004842GO:GO:0005634
GO:GO:0008270GO:GO:0009414GO:GO:0016567GO:GO:0016874
GO:GO:0051865hmmpanther:PTHR10825hmmpanther:PTHR10825:SF3HOGENOM:HOG000240404
InParanoid:Q9M9Y4IntAct:Q9M9Y4InterPro:IPR001841InterPro:IPR013083
InterPro:IPR017907KEGG:ath:AT1G06770KO:K16277OMA:EDEIETC
PaxDb:Q9M9Y4Pfam:PF00097Pfam:Q9M9Y4Pfscan:PS50089
PhylomeDB:Q9M9Y4PIR:E86202PRIDE:Q9M9Y4PRO:PR:Q9M9Y4
PROSITE:PS00518PROSITE:PS50089ProteinModelPortal:Q9M9Y4Proteomes:UP000006548
RefSeq:NP_172162.3RefSeq:NP_973775.1scanprosite:PS00518SMART:SM00184
SMR:Q9M9Y4STRING:3702.AT1G06770.1SUPFAM:SSF57850TAIR:AT1G06770
tair10-symbols:DRIP1UniGene:At.28756UniPathway:UPA00143UniProt:Q9M9Y4
Coordinates (TAIR10) chr1:-:2079222..2081707
Molecular Weight (calculated) 47330.60 Da
IEP (calculated) 10.19
GRAVY (calculated) -0.81
Length 421 amino acids
Sequence (TAIR10)
(BLAST)
001: MMIKVKKETM RACLSCSICD NILRDATTIS ECLHTFCRKC IYEKITEDEI ETCPVCNIDL GSTPLEKLRP DHNLQDLRAK IFALKRRKVK APGIVSLPGK
101: RKERSISSLV VSTPMVSAQA GTTRRRTKAP TRKELRNGSL AERTVKKEES SGDELLESTS SPDTLNKFTQ NKRQSKKSCK ESISNKENKD GDEPWDSKMD
201: WKPLNFLVEV ANGTKPLKSS ASQGSGSKSE HANVSRNQFQ GSKTKTKNKK RKCKREDDKS NNGDPTTSET VTPKRMRTTQ RKRSATTLGD SRNLPQPDES
301: SAKQERRNGP VWFSLVASND QEGGTSLPQI PANFLRIRDG NTTVSFIQKY LMRKLDLESE NEIEIKCMGE AVIPTLTLYN LVDLWLQKSS NHQRFAALVG
401: SSAKDFTMVL VYARKLPECN M
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)