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AT1G06290.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : acyl-CoA oxidase 3
Curator
Summary (TAIR10)
Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids.
Computational
Description (TAIR10)
acyl-CoA oxidase 3 (ACX3); FUNCTIONS IN: acyl-CoA oxidase activity; INVOLVED IN: medium-chain fatty acid metabolic process, fatty acid beta-oxidation; LOCATED IN: peroxisome; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 6 (TAIR:AT1G06310.1); Has 12520 Blast hits to 12510 proteins in 1399 species: Archae - 229; Bacteria - 8347; Metazoa - 1502; Fungi - 589; Plants - 297; Viruses - 0; Other Eukaryotes - 1556 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT1G06290-MONOMERBioGrid:22381BRENDA:1.3.3.6EC:1.3.3.6
eggNOG:COG1960eggNOG:KOG0135EMBL:AC068143EMBL:AF207994
EMBL:AF253474EMBL:AK176257EMBL:AY099579EMBL:BT008413
EMBL:CP002684EnsemblPlants:AT1G06290EnsemblPlants:AT1G06290.1entrez:837140
GeneID:837140Genevisible:P0CZ23GO:GO:0000062GO:GO:0003995
GO:GO:0003997GO:GO:0005777GO:GO:0006635GO:GO:0009055
GO:GO:0033539GO:GO:0033540GO:GO:0050660GO:GO:0051791
GO:GO:0052890GO:GO:0055088Gramene:AT1G06290.1hmmpanther:PTHR10909
hmmpanther:PTHR10909:SF11HOGENOM:HOG000245077InParanoid:P0CZ23IntAct:P0CZ23
InterPro:IPR002655InterPro:IPR006091InterPro:IPR009075InterPro:IPR009100
InterPro:IPR012258KEGG:00071+1.3.3.6KEGG:00592+1.3.3.6KEGG:ath:AT1G06290
KO:K00232OMA:CPVIPSQPaxDb:P0CZ23Pfam:P0CZ23
Pfam:PF00441Pfam:PF01756Pfam:PF02770PhylomeDB:P0CZ23
PIR:G86198PIRSF:PIRSF000168PRIDE:P0CZ23PRO:PR:P0CZ23
ProteinModelPortal:P0CZ23Proteomes:UP000006548RefSeq:NP_172119.1SMR:P0CZ23
STRING:3702.AT1G06290.1SUPFAM:SSF47203SUPFAM:SSF56645TAIR:AT1G06290
tair10-symbols:ACX3tair10-symbols:ATACX3UniGene:At.14938UniPathway:UPA00661
UniProt:P0CZ23
Coordinates (TAIR10) chr1:+:1922423..1926002
Molecular Weight (calculated) 75680.60 Da
IEP (calculated) 8.08
GRAVY (calculated) -0.26
Length 675 amino acids
Sequence (TAIR10)
(BLAST)
001: MSDNRALRRA HVLANHILQS NPPSSNPSLS RELCLQYSPP ELNESYGFDV KEMRKLLDGH NVVDRDWIYG LMMQSNLFNR KERGGKIFVS PDYNQTMEQQ
101: REITMKRIWY LLENGVFKGW LTETGPEAEL RKLALLEVCG IYDHSVSIKV GVHFFLWGNA VKFFGTKRHH EKWLKNTEDY VVKGCFAMTE LGHGSNVRGI
201: ETVTTYDPKT EEFVINTPCE SAQKYWIGGA ANHATHTIVF SQLHINGTNQ GVHAFIAQIR DQDGSICPNI RIADCGHKIG LNGVDNGRIW FDNLRIPREN
301: LLNAVADVSS DGKYVSSIKD PDQRFGAFMA PLTSGRVTIA SSAIYSAKVG LSIAIRYSLS RRAFSVTANG PEVLLLDYPS HQRRLLPLLA KTYAMSFAAN
401: ELKMIYVKRT PETNKAIHVV SSGFKAVLTW HNMHTLQECR EAVGGQGVKT ENLVGQLKGE FDVQTTFEGD NNVLMQQVSK ALFAEYVSCK KRNKPFKGLG
501: LEHMNSPRPV LPTQLTSSTL RCSQFQTNVF CLRERDLLEQ FTSEVAQLQG RGESREFSFL LSHQLAEDLG KAFTEKAILQ TILDAEAKLP TGSVKDVLGL
601: VRSMYALISL EEDPSLLRYG YLSQDNVGDV RREVSKLCGE LRPHALALVT SFGIPDSFLS PIAFNWVEAN AWSSV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)