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AT1G04630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GRIM-19 protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
maternal effect embryo arrest 4 (MEE4); CONTAINS InterPro DOMAIN/s: GRIM-19 (InterPro:IPR009346); BEST Arabidopsis thaliana protein match is: GRIM-19 protein (TAIR:AT2G33220.1); Has 332 Blast hits to 332 proteins in 145 species: Archae - 0; Bacteria - 0; Metazoa - 162; Fungi - 83; Plants - 65; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-51-MONOMEReggNOG:ENOG4111KIBeggNOG:KOG3300EMBL:AC002376
EMBL:AK118461EMBL:AY093225EMBL:BT002116EMBL:CP002684
EnsemblPlants:AT1G04630EnsemblPlants:AT1G04630.1entrez:839465GeneID:839465
GO:GO:0005739GO:GO:0005747GO:GO:0009793GO:GO:0009853
GO:GO:0016021GO:GO:0031966GO:GO:0045271GO:GO:0055114
Gramene:AT1G04630.1hmmpanther:PTHR12966hmmpanther:PTHR12966:SF0HOGENOM:HOG000195836
InParanoid:Q8RWA7InterPro:IPR009346KEGG:ath:AT1G04630KO:K11353
OMA:GFEAIKYPANTHER:PTHR12966PaxDb:Q8RWA7Pfam:PF06212
Pfam:Q8RWA7PhylomeDB:Q8RWA7PIR:A86179PRIDE:Q8RWA7
PRO:PR:Q8RWA7Proteomes:UP000006548RefSeq:NP_171957.2STRING:3702.AT1G04630.1
TAIR:AT1G04630tair10-symbols:MEE4TCDB:3.D.1.6.3TMHMM:TMhelix
UniGene:At.20547UniProt:Q8RWA7
Coordinates (TAIR10) chr1:-:1289921..1290986
Molecular Weight (calculated) 16126.50 Da
IEP (calculated) 9.63
GRAVY (calculated) -0.49
Length 143 amino acids
Sequence (TAIR10)
(BLAST)
001: MTEAMIRNKP GMASVKDMPL LQDGPPPGGF APVRYARRIS NTGPSAMAMF LAVSGAFAWG MYQVGQGNKI RRALKEEKYA ARRTILPILQ AEEDERFVSE
101: WKKYLEYEAD VMKDVPGWKV GENVYNSGRW MPPATGELRP DVW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)