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AT1G03940.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.952
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G03495.1); Has 1873 Blast hits to 1858 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 18; Plants - 1853; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G03940-MONOMERBioCyc:MetaCyc:MONOMER-18503EC:2.3.1.-eggNOG:ENOG410IISU
eggNOG:ENOG410ZBAMEMBL:AC003027EMBL:CP002684EnsemblPlants:AT1G03940
EnsemblPlants:AT1G03940.1entrez:839366Gene3D:3.30.559.10GeneID:839366
Genevisible:Q9ZWB4GO:GO:0016747Gramene:AT1G03940.1hmmpanther:PTHR31625
hmmpanther:PTHR31625:SF2HOGENOM:HOG000237788InterPro:IPR003480InterPro:IPR023213
KEGG:ath:AT1G03940OMA:FFADCRDPaxDb:Q9ZWB4Pfam:PF02458
Pfam:Q9ZWB4PhylomeDB:Q9ZWB4PIR:C86170PRIDE:Q9ZWB4
PRO:PR:Q9ZWB4ProteinModelPortal:Q9ZWB4Proteomes:UP000006548RefSeq:NP_171890.1
SMR:Q9ZWB4STRING:3702.AT1G03940.1TAIR:AT1G03940UniGene:At.48149
UniProt:Q9ZWB4
Coordinates (TAIR10) chr1:-:1009542..1010951
Molecular Weight (calculated) 51928.60 Da
IEP (calculated) 7.12
GRAVY (calculated) -0.14
Length 469 amino acids
Sequence (TAIR10)
(BLAST)
001: MVAHLQPPKI IETCHISPPK GTVPSTTLPL TFFDAPWLSL PLADSLFFFS YQNSTESFLQ DFVPNLKHSL SITLQHFFPY AGKLIIPPRP DPPYLHYNDG
101: QDSLVFTVAE STETDFDQLK SDSPKDISVL HGVLPKLPPP HVSPEGIQMR PIMAMQVTIF PGAGICIGNS ATHVVADGVT FSHFMKYWMS LTKSSGKDPA
201: TVLLPSLPIH SCRNMIKDPG EVGAGHLERF WSQNSAKHSS HVTPENMVRA TFTLSRKQID NLKSWVTEQS ENQSPVSTFV VTLAFIWVSL IKTLVQDSET
301: KANEEDKDEV FHLMINVDCR NRLKYTQPIP QTYFGNCMAP GIVSVKKHDL LGEKCVLAAS DAITARIKDM LSSDLLKTAP RWGQGVRKWV MSHYPTSIAG
401: APKLGLYDMD FGLGKPCKME IVHIETGGSI AFSESRDGSN GVEIGIALEK KKMDVFDSIL QQGIKKFAT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)