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AT1G02020.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nitroreductase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nitroreductase family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH, nitrogenous group as acceptor, oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nitroreductase-like (InterPro:IPR000415); Has 762 Blast hits to 681 proteins in 314 species: Archae - 126; Bacteria - 594; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0778eggNOG:ENOG410IE3JEMBL:AY070057EMBL:AY122987
EMBL:CP002684EMBL:U89959EnsemblPlants:AT1G02020EnsemblPlants:AT1G02020.1
entrez:837477ExpressionAtlas:O23673Gene3D:3.40.109.10GeneID:837477
GO:GO:0009507GO:GO:0016491Gramene:AT1G02020.1hmmpanther:PTHR23026
hmmpanther:PTHR23026:SF102HOGENOM:HOG000009405InterPro:IPR000415InterPro:IPR029479
KEGG:ath:AT1G02020OMA:AFRYCQLPfam:PF00881PhylomeDB:O23673
PIR:C86152Proteomes:UP000006548RefSeq:NP_171704.2STRING:3702.AT1G02020.1
SUPFAM:SSF55469TAIR:AT1G02020UniGene:At.28417UniProt:O23673
Coordinates (TAIR10) chr1:-:352842..354845
Molecular Weight (calculated) 71369.60 Da
IEP (calculated) 6.65
GRAVY (calculated) -0.24
Length 642 amino acids
Sequence (TAIR10)
(BLAST)
001: MSNPRQRKGE AMMNPTISWR FASSTSLLSI PRTPKSAFIF AMTFSSSSSS SSSSSSVENP NKDDSSSSLE LVLKYHNQTK HSLNGYARGP RGLDWANQPN
101: PFRRYLSAPL LPLQHPNHDI DDDSDSPLYS TLFDSLPPPK PISLPTISHL FYHSLALSAW KTTGSSTWPL RVNPSSGNLH PTEAYLIAPP IPSLSQSAFV
201: SHYAPKEHSL EVRAHIPSSF FPNFFPENSF LIGISSIFWR EAWKYGERAF RYCNHDVGHA IAALSIAAAD LGWDLKLLDA FGADDLKRLM GLPEFQLPEG
301: KGKAELPEIE FEHPDCLLLV FPNGTSREHL NLDYLAISSA LRDFPSLEWT GNPNTLSKEH LCWDIIYRTA KAVEKPPLIY STSSSSIDVA SFTSSRALFS
401: HSSYNKLTVR QVVRTRRSAV DMDAVTCIDM SSFYQMLMHC LPSTGESQKE QLALPFRALP WDTAEVHLAL FVHRVSGLPK GLYLLVRNED HLSDLKTATR
501: PEFEWTKPDG CPDNLPLYKL AEGDCQRLAK GLSCHQDIAG DGCFSLGMIA RFEPALREKG SWMYPRLFWE TGVVGQVLYL EAHAMGISAT GIGCYFDDPV
601: HEVLGINDSS FQSLYHFTVG GPVVDKRIMT LPAYPGPTTT VA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)