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AT1G01990.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 0.764
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 32 Blast hits to 32 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JWUTeggNOG:ENOG41104KEEMBL:AC020622EMBL:AF332443
EMBL:AK227562EMBL:BT003065EMBL:CP002684EnsemblPlants:AT1G01990
EnsemblPlants:AT1G01990.1entrez:837456GeneID:837456Gramene:AT1G01990.1
HOGENOM:HOG000153065KEGG:ath:AT1G01990ncoils:CoilOMA:PGRVMEY
PhylomeDB:Q9LPC2PIR:H86151Proteomes:UP000006548RefSeq:NP_563642.1
TAIR:AT1G01990UniGene:At.24785UniProt:Q9LPC2
Coordinates (TAIR10) chr1:-:343462..344199
Molecular Weight (calculated) 27915.40 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.35
Length 245 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSLVKAYYC NQMHHNSIIP HFHHYRPSSL QNPISLFAIT SPSSSEPPSP PVKHPLPQFG GGGHFIIPTI AVAASAWFFF RLHQYPPIIT SPVDLHLDLE
101: EEGAIKELPL ESKPGYVKAL HFYKIKPGTV LKLLDVFDSD SYDSLKARIR LSAEWLETAR RELEEVVERD PGRVMEYSQV VDELMEILRD MEVYIDKCQK
201: DNVKGYLRSC NRLLARVRRM EAQILNVLKE FHDDHDQGGG GGDTY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)