AT5G61770.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : PETER PAN-like protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
PETER PAN-like protein (PPAN); CONTAINS InterPro DOMAIN/s: Brix domain (InterPro:IPR007109); Has 1471 Blast hits to 1151 proteins in 223 species: Archae - 0; Bacteria - 34; Metazoa - 730; Fungi - 196; Plants - 73; Viruses - 37; Other Eukaryotes - 401 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:24815888..24817495 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38972.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.07 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.56 | ||||||||||||||||||||||||||||||||
| Length | 346 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGRFKNNKKS RVIGKPIAKK NQEDVSHVTG DKIPKSFVFS RMKLAGPVKQ LQMDLRKLML PYTALSLKEK KRNTLRDFLN VSGPMGVTHF LMLSKTASSL 101: SLRVARTPQG PTLTFKIHQY SLASDIAQSQ LRPRCPQDLF KSPPLIVLSG FGSQELHLKL ATIMFQNIFP AIDINTVKLS TCQRLVLLNY NKDTKLIDFR 201: HYSIRLQPVG VSRRIRKFVQ NHQVPDLRNL QDVSDFVTKA GYGSESEGDE EAATVTLSSD LGRVNKGATK SAVKLQEIGP RMTMQLVKVE EGLCTGGIIF 301: SEYEDVDGKK EKLKKKQDEE EEEDSEEEGE EGSEEDGEDM DEDFED |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)