AT5G58370.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: barrier septum formation; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917), GTP-binding protein, ribosome biogenesis, YsxC (InterPro:IPR019987); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G22870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:23593358..23595645 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52453.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.82 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.64 | ||||||||||||||||||||||||||||||||||||||||
| Length | 465 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSLDTSLGLK LKKRLKLSSF SSNSSYKGKS RSITQRSDDD TNSRKTTVSS MKKKRVYPNK AKHNNHVNEI PRTMWVASKR NQGSTSSFKT ANDAATSVFK 101: TKSRSGVDVT RKSYRKRDEL DSNVDVSPRE SSDVPSFKAR KQVFSEKRVV GDGSDVQEDK PRKRKRIRLD PYDTSNKRIV DDVLLDDGLR VKNIKDAVKS 201: VEMSKNAQFR AIQPSHSILS YVEENLLGRR RLIELKRAGY NTELPAPLDN IPQSTSTERE RIEESVFRNK LEFFAAANVS SSFPPPDVPE IAFAGRSNVG 301: KSSLLNALTR QWGVVRTSDK PGLTQTINFF GLGPKVRLVD LPGYGFAFAK DEVKEAWEDL VKEYVSTRTS LKRVCLLVDT KWGMKPRDQE LINLMERSNT 401: KYQIVLTKTD VVFPIDVARR AMQIEEKLKA NRSIVQPLMM VSSRSGAGIG SLRTALAKIA RFAKF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)