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AT5G47070.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G17660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G47070-MONOMERBioGrid:20001EC:2.7.11.1eggNOG:COG0515eggNOG:KOG1187EMBL:AB025609EMBL:AK117556
EMBL:BT005677EMBL:CP002688EnsemblPlants:AT5G47070EnsemblPlants:AT5G47070.1entrez:834753Gene3D:2.60.120.200GeneID:834753
Genevisible:Q9LTC0GO:GO:0004674GO:GO:0005524GO:GO:0005886Gramene:AT5G47070.1hmmpanther:PTHR27001hmmpanther:PTHR27001:SF75
HOGENOM:HOG000116550InParanoid:Q9LTC0InterPro:IPR000719InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441iPTMnet:Q9LTC0KEGG:ath:AT5G47070KO:K00924OMA:WVKEYPAPaxDb:Q9LTC0Pfam:PF07714
Pfam:Q9LTC0Pfscan:PS50011PhylomeDB:Q9LTC0PRIDE:Q9LTC0PRO:PR:Q9LTC0PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:Q9LTC0Proteomes:UP000006548RefSeq:NP_199518.1scanprosite:PS00107scanprosite:PS00108SMR:Q9LTC0
STRING:3702.AT5G47070.1SUPFAM:SSF56112TAIR:AT5G47070UniGene:At.29914UniProt:Q9LTC0
Coordinates (TAIR10) chr5:-:19118683..19120528
Molecular Weight (calculated) 46826.20 Da
IEP (calculated) 10.06
GRAVY (calculated) -0.65
Length 410 amino acids
Sequence (TAIR10)
(BLAST)
001: MNCLFLFKSK KPRKQQKDNN KNKRKGKELL QNSAPELTNR SETSSFNLQT PRSLPSPRSI KDLYTEREQN LRVFSYEELS KATYVFSRKL VIGEGGFGIV
101: YKGKILSNGD SSDPPLVVAI KKLNRQGLQG HKQWLAEVQF LGVVNHPNVV KLIGYCSEDG ETGIERLLVY EYMSNRSLED HLFPRRSHTL PWKKRLEIML
201: GAAEGLTYLH DLKVIYRDFK SSNVLLDDQF CPKLSDFGLA REGPDGDNTH VTTARVGTHG YAAPEYVQTG HLRLKSDVYS FGVVLYEIIT GRRTIERNKP
301: VAERRLLDWV KEYPADSQRF SMIVDPRLRN NYPAAGARSL AKLADLCLKK NDKERPTMEI VVERLKKIIE ESDSEDYPMA TTTTKESSQV RRRQVAKPEK
401: QSLRGVSVRG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)