AT5G24360.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.974 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : inositol requiring 1-1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
inositol requiring 1-1 (IRE1-1); FUNCTIONS IN: endoribonuclease activity, producing 5'-phosphomonoesters, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, mRNA processing; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), KEN domain, ribonuclease activator (InterPro:IPR010513), PUG domain (InterPro:IPR006567), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Quinonprotein alcohol dehydrogenase-like (InterPro:IPR011047); BEST Arabidopsis thaliana protein match is: Endoribonuclease/protein kinase IRE1-like (TAIR:AT2G17520.1). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:8316718..8319827 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 100640.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.32 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 887 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTNLSPIKSL NPIGFDLIRK CQHLFDLVSK LTPLYKSEFL TNYNDRDIYR ESGYVLVSTV DGSISLVDMS SQKLDWTFHT NEPIYSSYQA PHYHYTTDEE 101: RSSVLGDDFY MDCDKDWRLY NSSVRKGKRV NEIVDASEFI GTLPYTSTDR IVLGKKDTSV FLLDWKTGKL VKRYRMDELY SNTVVENDKE KAIVLSKEAP 201: LLFGSGFKKS EDFPELVYIE RKDFKIQCIS KFGDVLWSVS YAKMEAKLQN HESVQFISGL SSSVGKNQFP LSYTTSVPMV QLRNVKYETL FPRLGFLDEA 301: LYLPFQDRKP NQLAIGDGNQ LTLPGNKEAE EVLSLPLPET VISQITDIID GSTKQAGFAS KFSGLIVLIF GFCVTMLSVC GLFFYRLRQS IRIKEPYVSE 401: VPIATPKKKK SKKNGTTKAV HKKENGFISG GNKDPSHEEN EKRLLTAFPG LNNSSAEGYR VGKLFVSNKE IAKGSNGTVV LEGSYEGRLV AVKRLVQSHH 501: DVAQKEILNL MASDKHSNIV RWYGVDQDEH FIYISLELCA CSLNDLIYAS SALLESPMAS SSIHSIQINP IFENGKGVEL WKENGHPSPV LLKLMRDIVA 601: GLVHLHDIGI VHRDLKPQNV LIVKNSSLCA KLSDMGISKR LPADTSALTR NSTGLGSGSS GWQAPEQLRN ERQTRAVDLF SLGCVLFFCM TGGKHPYGDN 701: YERDVNVLND QKDLFLIESL PEAVHLLTGL LNPDPNLRPR AQDVMHHPLF WNSDMRLSFL RDASDRVELE NREEGSQLLA ALESTAAVTL NGRWDEKLDS 801: IFLDNIGRYR RYKFDSIRDL LRVIRNKLNH YRELPKELQE LLGSVPEGFE RYFSSRFPKL LIQVYTVLFD YCNNEEFFFK YSKTTVF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)