AT4G31430.2
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:+:15248510..15252204 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61174.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.23 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.79 | ||||||||||||||||||||||||||||||||||||
| Length | 574 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDSVSGYAAG AGQPRVGGKI VRPRRTAVVR TPCERPVQRS RDPPQQNPSW ISRLVYKPAS VIASGAGKFI SSVVFSDSSS SSEEDEDSSS DIDGDEDVEK 101: NNPDFTEEDL LSAQQPSIQR LSSKRVIEQL LLQETFAREE GDRLIDIIKA RVVDHPSVPS AIETSHDDYG LTSDVNVGEM SNTAVMEARK WLEEKKSGSS 201: SKYKATEDGA GSPVDVAKSY MRARLPWGSP AANNLDFRSP SSARVQGTPL PYSAGNFSSS KLKRKSGSNQ SWNIQDEIRK VRAKATEEML KSPSSVASLE 301: PKYSPYVLAT DMLKGNASSL NADGAVRNEQ SRALPNSAIP TSEHNQTTEA NQAVKETGVL HTRSRGVGLE ETFISTQGVK PSEDTNTAPQ SGTAVDDFND 401: QDGDFIQPTS TIGNTTNAVL ALGATLDPTG NSCIPKDVFE TSKEADEIGA SRHTSNGFPS SSPSSPAVME GQPKPTPPEE TKASQPIAEI HGDDMTVGNG 501: SDGAINNESN DSHSSASNSS STHEEEWLPG DQSLPNSNSA SSSPGNTKVL AYSRRGRGRG RGRGRGGRGK GRAK |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)