AT4G02200.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Drought-responsive family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Drought-responsive family protein; INVOLVED IN: response to water deprivation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Drought induced 19/ RING finger protein 114 (InterPro:IPR008598); BEST Arabidopsis thaliana protein match is: Drought-responsive family protein (TAIR:AT1G02750.1); Has 234 Blast hits to 234 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 234; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:972776..974203 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 26240.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.63 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.55 | ||||||||||||||||||||||||||||
| Length | 228 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEDLLGICG FDSSKKYRLE ELAKYQSGSC IEFEDDDEMA VDYPCPFCSD DYDLVELCHH IDEEHQLDAN NGFLHEAVSC KFRLFIICPV CSRRVKMHMV 101: DHITTQHRDV FKRLYKDESY SAFSPGTRKY LQSLIDEPLS TNHTSKSVLD PLLSFIYNPP SPKKSKLVQP DSSSEASMED NSLIRDSTEK DWESPSPLSD 201: TELLEKAKKR EFVQGLISSA IFDHIYNF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)