AT5G26030.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 ASURE: plastid What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ferrochelatase 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes ferrochelatase I located in plastids. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ferrochelatase 1 (FC1); FUNCTIONS IN: ferrochelatase activity; INVOLVED IN: response to oxidative stress, heme biosynthetic process, tetrapyrrole biosynthetic process; LOCATED IN: mitochondrion, chloroplast, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ferrochelatase, active site (InterPro:IPR019772), Ferrochelatase (InterPro:IPR001015); BEST Arabidopsis thaliana protein match is: ferrochelatase 2 (TAIR:AT2G30390.1); Has 7391 Blast hits to 7389 proteins in 2072 species: Archae - 19; Bacteria - 4136; Metazoa - 176; Fungi - 140; Plants - 115; Viruses - 0; Other Eukaryotes - 2805 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:9096675..9098752 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52035.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.56 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 466 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQATALSSGF NPLTKRKDHR FPRSCSQRNS LSLIQCDIKE RSFGESMTIT NRGLSFKTNV FEQARSVTGD CSYDETSAKA RSHVVAEDKI GVLLLNLGGP 101: ETLNDVQPFL YNLFADPDII RLPRPFQFLQ GTIAKFISVV RAPKSKEGYA AIGGGSPLRK ITDEQADAIK MSLQAKNIAA NVYVGMRYWY PFTEEAVQQI 201: KKDKITRLVV LPLYPQYSIS TTGSSIRVLQ DLFRKDPYLA GVPVAIIKSW YQRRGYVNSM ADLIEKELQT FSDPKEVMIF FSAHGVPVSY VENAGDPYQK 301: QMEECIDLIM EELKARGVLN DHKLAYQSRV GPVQWLKPYT DEVLVDLGKS GVKSLLAVPV SFVSEHIETL EEIDMEYREL ALESGVENWG RVPALGLTPS 401: FITDLADAVI ESLPSAEAMS NPNAVVDSED SESSDAFSYI VKMFFGSILA FVLLLSPKMF HAFRNL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)