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AT3G59900.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
endoplasmic reticulum 0.996
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
FP Images

Arabidopsis cell culture (endoplasmic reticulum marker)

At3g59900-GFP
(full-length)
endoplasmic reticulum marker-RFPoverlay

Images by Sandra Tanz

Arabidopsis cell culture (plastidal marker)

At3g59900-GFP
(full-length)
plastidal marker-RFPoverlay

Images by Sandra Tanz
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : auxin-regulated gene involved in organ size
Curator
Summary (TAIR10)
Encodes ARGOS (Auxin-Regulated Gene Involved in Organ Size). Inducible by auxin. Involved in lateral organ size control. Transgenic plants expressing sense or antisense ARGOS cDNA display enlarged or reduced aerial organs, respectively. The alteration in organ size is attributable mainly to changes in cell number and the duration of organ growth.
Computational
Description (TAIR10)
AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE (ARGOS); BEST Arabidopsis thaliana protein match is: ARGOS-like (TAIR:AT2G44080.1); Has 87 Blast hits to 87 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:10474eggNOG:ENOG410J7TTeggNOG:ENOG4111AW2EMBL:AK176640EMBL:AL138647EMBL:AY305869EMBL:BT011724
EMBL:CP002686EMBL:EF597812EMBL:EF597813EMBL:EF597814EMBL:EF597815EMBL:EF597816EMBL:EF597817
EMBL:EF597818EMBL:EF597819EMBL:EF597820EMBL:EF597821EMBL:EF597822EMBL:EF597824EMBL:EF597825
EMBL:EF597826EMBL:EF597827EnsemblPlants:AT3G59900EnsemblPlants:AT3G59900.1entrez:825160GeneID:825160Genevisible:Q6NMD6
GO:GO:0005622GO:GO:0005634GO:GO:0005737GO:GO:0005783GO:GO:0007275GO:GO:0009733GO:GO:0016020
GO:GO:0016021GO:GO:0042127GO:GO:0046622GO:GO:0048638GO:GO:0071369Gramene:AT3G59900.1hmmpanther:PTHR36023
hmmpanther:PTHR36023:SF3InParanoid:Q6NMD6KEGG:ath:AT3G59900OMA:AMTSENSPaxDb:Q6NMD6Pfam:Q6NMD6PhylomeDB:Q6NMD6
PIR:T47814PRIDE:Q6NMD6PRO:PR:Q6NMD6Proteomes:UP000006548RefSeq:NP_191549.2STRING:3702.AT3G59900.1TAIR:AT3G59900
tair10-symbols:ARGOSTMHMM:TMhelixUniGene:At.34537UniProt:Q6NMD6
Coordinates (TAIR10) chr3:+:22130041..22130433
Molecular Weight (calculated) 14696.40 Da
IEP (calculated) 10.46
GRAVY (calculated) 0.18
Length 130 amino acids
Sequence (TAIR10)
(BLAST)
001: MIREISNLQK DIINIQDSYS NNRVMDVGRN NRKNMSFRSS PEKSKQELRR SFSAQKRMMI PANYFSLESL FLLVGLTASL LILPLVLPPL PPPPFMLLLV
101: PIGIMVLLVV LAFMPSSHSN ANTDVTCNFM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)