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AT3G56400.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : WRKY DNA-binding protein 70
Curator
Summary (TAIR10)
member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1.
Computational
Description (TAIR10)
WRKY DNA-binding protein 70 (WRKY70); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 54 (TAIR:AT2G40750.1); Has 3203 Blast hits to 2772 proteins in 182 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3190; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Protein Annotations
BioGrid:10123eggNOG:ENOG410J05GeggNOG:ENOG410YZZYEMBL:AF421157EMBL:AL163972EMBL:AY039933EMBL:AY087389
EMBL:AY142566EMBL:CP002686EnsemblPlants:AT3G56400EnsemblPlants:AT3G56400.1entrez:824807Gene3D:2.20.25.80GeneID:824807
Genevisible:Q9LY00GO:GO:0003700GO:GO:0005634GO:GO:0006351GO:GO:0009751GO:GO:0009753GO:GO:0009862
GO:GO:0009864GO:GO:0010200GO:GO:0031347GO:GO:0042742GO:GO:0043565GO:GO:0045892GO:GO:0050832
GO:GO:1900056Gramene:AT3G56400.1hmmpanther:PTHR31282hmmpanther:PTHR31282:SF37HOGENOM:HOG000146339InParanoid:Q9LY00IntAct:Q9LY00
InterPro:IPR003657KEGG:ath:AT3G56400OMA:NHTCNTNPaxDb:Q9LY00Pfam:PF03106Pfam:Q9LY00Pfscan:PS50811
PhylomeDB:Q9LY00PIR:T49041PRO:PR:Q9LY00PROSITE:PS50811ProteinModelPortal:Q9LY00Proteomes:UP000006548RefSeq:NP_191199.1
SMART:SM00774SMR:Q9LY00STRING:3702.AT3G56400.1SUPFAM:0050605SUPFAM:SSF118290TAIR:AT3G56400tair10-symbols:ATWRKY70
tair10-symbols:WRKY70UniGene:At.5242UniProt:Q9LY00
Coordinates (TAIR10) chr3:-:20909082..20910409
Molecular Weight (calculated) 32937.30 Da
IEP (calculated) 6.23
GRAVY (calculated) -0.72
Length 294 amino acids
Sequence (TAIR10)
(BLAST)
001: MDTNKAKKLK VMNQLVEGHD LTTQLQQLLS QPGSGLEDLV AKILVCFNNT ISVLDTFEPI SSSSSLAAVE GSQNASCDND GKFEDSGDSR KRLGPVKGKR
101: GCYKRKKRSE TCTIESTILE DAFSWRKYGQ KEILNAKFPR SYFRCTHKYT QGCKATKQVQ KVELEPKMFS ITYIGNHTCN TNAETPKSKT CDHHDEIFMD
201: SEDHKSPSLS TSMKEEDNPH RHHGSSTEND LSLVWPEMVF EEDYHHQASY VNGKTSTSID VLGSQDLMVF GGGGDFEFSE NEHFSIFSSC SNLS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)