AT3G53930.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.857 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase, putative (InterPro:IPR020655), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G37840.1); Has 133875 Blast hits to 131243 proteins in 4644 species: Archae - 156; Bacteria - 15368; Metazoa - 49842; Fungi - 12879; Plants - 32788; Viruses - 546; Other Eukaryotes - 22296 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:19966541..19970580 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78902.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.39 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 712 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAQSSLVAAA GRSGRVIGDY AVGRQIGSGS FSVVWEGRHL VHGTVVAIKE IAMARLNKKL QESLMSEIII LRKINHPNII RFIDMIEAPG KINLVLEYCK 101: GGDLSMYIHK HGSVPEATAK HFMLQLAAGL QVLRDNNIIH RDLKPQNLLL STDDNDAALK IADFGFARSL QPRGLAETLC GSPLYMAPEI MQLQKYDAKA 201: DLWSVGAILF QLVTGRTPFT GNSQIQLLQN IIRSTELHFP ADCRDLSTDC KDLCQKLLRR NPVERLTFEE FFHHPFLSDK QSYDFTRSRL DSRTMNDFHS 301: SGSSPSRNIE EISQEDGLPF FLDDDSSGPE GSPSSFKHTS PMKSSYGFSV ERREAALSPL KNMDLSSRYS RVSHRAETNN FKFEGHRLSD RSQFKPSSLP 401: DSRSFSTQGR VGDSPDSMDQ DYVLISGPPV DIPSSSSGSP KPFNYPFKSH SPPVEFIKRN VTNLTAPMPI ASATGNNLSR FGSLESQNCI PGTSHGSLDL 501: VDAFEQPSTN SLTRIRSLQK CAAAIAELVH ERGENGKHLE AFSIQLVILA IWNQALHICH TQAVSGIEGS LLQDINRVGR NISHGGSEKL LPQIQKEFVQ 601: EVERAEELAK FVESDNAKMP DAMEMILQAA LALGISGGVD EVMGDAENAG NLYSKAVRLL VFLAVEAQTL ILNPPLTLTN SVRYRLRTYI DSLITRLKHL 701: QSHRRTSYPQ KQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)