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AT2G45320.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
mitochondrion 0.980
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; Has 45 Blast hits to 45 proteins in 16 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIUYeggNOG:ENOG4111UAEEMBL:CP002685EnsemblPlants:AT2G45320EnsemblPlants:AT2G45320.1entrez:819140GeneID:819140
Gramene:AT2G45320.1hmmpanther:PTHR35723hmmpanther:PTHR35723:SF1InParanoid:F4IW50InterPro:IPR029044KEGG:ath:AT2G45320OMA:INHYIFT
PaxDb:F4IW50PRIDE:F4IW50ProteinModelPortal:F4IW50Proteomes:UP000006548RefSeq:NP_850432.1SUPFAM:SSF53448TAIR:AT2G45320
UniGene:At.28129UniGene:At.66419UniProt:F4IW50
Coordinates (TAIR10) chr2:-:18684182..18686107
Molecular Weight (calculated) 43484.50 Da
IEP (calculated) 10.20
GRAVY (calculated) -0.12
Length 392 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSRRDYRSM RSCSGWRRIL LLIPVLFLLP HLSSLVDFSS DSATRNDART IPNKKLDHLV LGPVAGQGLS DRFHCRGTKA LNKTHGSTSH VSGAGNGVSF
101: VTVFTVYNTS LGNVKSSNPV SVVGNVTYSK PERSMAVLNA FANFIQVTMP KSNVVILTDP ASDLSIQQSN VILQPVQGDY SRGNLMLQRI RSYITFLEMK
201: LEKNEGGINH YIFTDSDIAV VDDVGTIFDK HSSFHLALTF RNNKDQPLNS GFIAVRGTRE GILRAKVFLE EVLKAYKTKY MKASRMLGDQ LALVSVVKSH
301: ASFDAKRFTK PQAFTEEIAG ASVLFLPCAL YNWTPPEGAG QFHGMPLDVK IVHFKGSRKR LMLEAWNFYK STSNIPDMLC LVLGSGRTKY DF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)