AT2G40270.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.739 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT3G56050.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:16822136..16824327 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53334.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.44 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||
| Length | 482 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLFKMRSFVA FVLLLSWFGS CCSLKDQAVD FLKSEDSLKK DLSSDEDSTY LKTLVRNPYK DLPSRKDRKN RVVAATTTPS SSPEPAPKHV STKASTVSEP 101: QKRSSTQDVS PSPSAPLANS PIPRNSHSSV PLVVGCVGGA FFLLLVATGL YFFTSKAGKT VNPWRTGLSG QLQKVFVTGI PVLKRSEIEA ACEDFSNVIG 201: SCPIGKLFKG TLSSGVEIAV ASFATTTAKD WKDSTEIHFR KKIEMLSKIN HKNFANLLGY CEEKEPFTRI LIFEYAPNGS LFEHLHYKES EHLDWGMRLR 301: IAMGLAYCLD HMHQLNPPIA HTNLVSSSLQ LTEDYAVKVS DFSFGSSETE TNINNNTVID THISALNPED NIYSFGLLLF EMITGKLIES VNKPDSVDSS 401: LVDFLRGETL AKMVDPTLES YDAKIENIGE VIKSCLRTDP KERPTMQEVT GWLREITGLS PNDATPKLSP LWWAELEVLS TA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)