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AT2G33770.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 0.841
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24122829 (2013): endoplasmic reticulum endoplasmic reticulum membrane
  • PMID:24122829 (2013): Golgi trans-Golgi network
  • PMID:22634761 (2012): endoplasmic reticulum
  • PMID:22634761 (2012): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : phosphate 2
Curator
Summary (TAIR10)
Encodes a ubiquitin-conjugating E2 enzyme. UBC24 mRNA accumulation is suppressed by miR399f, miR399b and miR399c. Involved in phosphate starvation response.
Computational
Description (TAIR10)
phosphate 2 (PHO2); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 23 (TAIR:AT2G16920.1); Has 6405 Blast hits to 6302 proteins in 368 species: Archae - 0; Bacteria - 0; Metazoa - 2716; Fungi - 1263; Plants - 1493; Viruses - 17; Other Eukaryotes - 916 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G33770-MONOMERBioGrid:3290EC:2.3.2.23eggNOG:ENOG410XQ7WeggNOG:KOG0895EMBL:AK229934EMBL:AK230162
EMBL:AY074292EMBL:AY091326EMBL:CP002685EMBL:DQ027037EMBL:U78721EnsemblPlants:AT2G33770EnsemblPlants:AT2G33770.1
entrez:817943Gene3D:3.10.110.10GeneID:817943Genevisible:Q8VY10GO:GO:0005524GO:GO:0005783GO:GO:0005794
GO:GO:0006817GO:GO:0016036GO:GO:0031625GO:GO:0044257GO:GO:0055062GO:GO:0061630GO:GO:2000185
hmmpanther:PTHR24067hmmpanther:PTHR24067:SF97HOGENOM:HOG000237457InParanoid:Q8VY10InterPro:IPR000608InterPro:IPR016135KEGG:ath:AT2G33770
KO:K10581OMA:PHEPPMVPaxDb:Q8VY10Pfam:PF00179Pfam:Q8VY10Pfscan:PS50127PhylomeDB:Q8VY10
PIR:D84749PRIDE:Q8VY10PRO:PR:Q8VY10PROSITE:PS50127ProteinModelPortal:Q8VY10Proteomes:UP000006548RefSeq:NP_850218.1
SMR:Q8VY10STRING:3702.AT2G33770.1SUPFAM:SSF54495TAIR:AT2G33770tair10-symbols:ATUBC24tair10-symbols:PHO2tair10-symbols:UBC24
UniGene:At.14693UniPathway:UPA00143UniProt:Q8VY10
Coordinates (TAIR10) chr2:-:14277785..14281482
Molecular Weight (calculated) 100489.00 Da
IEP (calculated) 4.68
GRAVY (calculated) -0.32
Length 907 amino acids
Sequence (TAIR10)
(BLAST)
001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)