AT2G32170.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: N2227-like (InterPro:IPR012901); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G32160.3); Has 521 Blast hits to 462 proteins in 193 species: Archae - 0; Bacteria - 2; Metazoa - 153; Fungi - 192; Plants - 76; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:13666476..13670924 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 65353.20 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.22 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||
| Length | 571 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVSPSEMTET APAIMTTESE RIESSRELVD NEEEEKIRRQ KKLEEALEAK SLRRIISAYL NYPEASEEDL KRWERSYRKL SPAHKALVPH YPMKFQRLRR 101: CISANSYFIF NMLQAFEPPI DLSQELDGCE DSNLDCAPHE RYTLDERHDS SCQPALTNSC TYKEESKHIR DPITGVSIEE LQRKEAHDHS PKDDSADTRI 201: NDKTCDCHEG QLNHDHGSVS FSSHDWLDSS LQTHVPLVDV DKRETKIIMC HVRTYSQSLL VPLGSLVSYE GWFAHVALHG EVNPVELKCT FLHVRCIIRN 301: IVRDWAAEGQ RERDQCYKPI LEELDSLFPD RLKESTCCIH SPYKVDYMIC STPPACLVPG AGLGRLALEI SCLGFISQGN EFSYYMMICS SFILNYTQVP 401: GEWTIYPWIH SNCNSLSDND QLRPIAIPDI HPASAGITEG FSMCGGDFVE VYNESSHAGM WDAVVTCFFI DTAHNVIEYI QTISKILKDG GVWINLGPLL 501: YHFADTYGHE NEMSIELSLE DVKRVASHFG FVIEKERTIE TTYTTNPRAM MQNRYYTAFW TMRKKCAITT T |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)