AT2G31060.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : elongation factor family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
elongation factor family protein; FUNCTIONS IN: GTP binding, translation elongation factor activity, GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein TypA (InterPro:IPR006298), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: elongation factor family protein (TAIR:AT5G13650.2). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:13213496..13218544 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 72939.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.71 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 671 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAGPLLRSLW SNTTRRSFSS HSSPSKFGYS LSSLRSFSAA TASTAAAGAP NSSLDPNRLR NVAVIAHVDH GKTTLMDRLL RQCGADIPHE RAMDSINLER 101: ERGITISSKV SPFVTSIFWK DNELNMVDTP GHADFGGEVE RVVGMVEGAI LVVDAGEGPL AQTKFVLAKA LKYGLRPILL LNKVDRPSVT EERCDEVESL 201: VFDLFANCGA TEEQLDFPVL YASAKEGWAS STYTKDPPVD AKNMADLLDA VVRHVQPPKA NLDEPFLMLV SMMEKDFYLG RILTGRVTSG VVRVGDRVNG 301: LRKTDSGSEK IEEAKVVKLM KKKGTTIVSI DAAGAGDIIC MAGLTAPSIG HTVASAEVTT ALPTVELDPP TISMTFGVND SPLAGQDGTH LTGGRIGDRL 401: MAEAETNLAI NVIPGLSESY EVQGRGELQL GILIENMRRE GFELSVSPPK VMYKTEKGQK LEPIEEVTIE INDEHVGLVM EALSHRRAEV IDMGPVPGNE 501: GRTRLSLTCP SRGLVGYRCV FSSDTRGTGF MHRAFLTYEK YRGPLGNVRK GVLVSMARGT ITAHSLMSLE ARGILFVSPG LDSYDGMIIG EHSRETDLDL 601: NPVKAKELTN IRSAGKDENV KLSPPRLMTL EEAIGYVASD ELIEVTPKTI RLRKRCLDVN KRKSQSKRAK D |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)