AT2G25730.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.807 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages. | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:10956751..10972729 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 277311.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.60 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||
| Length | 2487 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MDKETEILSR LAANHLHLAQ FEPLKATLLA LRVRNPDLAL TILQTIVSNA GRFDNVLWSR SCPSPSLLSF LSTIELLRFE NPTSPWGFDS ETLSLRADFL 0101: LMVQVLIDRV TERIKEDEES EDENSGLGNC LRVLQGVLEL GVERLKFVVD TSSSEGSNKI EEDAVVSLRS IVLDYSDVFD ALCCNIQRQL AGCESYGTCL 0201: VEEVQGEEQR KEMNEATCIG SPELDNINVF ALIQRNVQLA QLDAMKTKLD EGDERGAADR IRYLHLDYGV EKENYHAVLK ALLSRVMEKK DEYGDSWHMV 0301: RQNLLFMYKE ALSSNCGDLV QMIQGIQDDM LLPHSQLHLS LDNEQIPLPL ECFRRYLVDL KTERNIEDKS SPMSRAINSC LRDMYHYARI SGSHVLECVM 0401: CAALSSVKKE KLQEANDVLT LFPRLRPLVA SMGWDLLPGK TATRRKLMRL LWTSDSQALR LEESSLYGNQ TDEKSCVEHL CDTLCYQLEL ASFAACVNSG 0501: KSWTPKASFL MHGNVSSAHD DAEVDPFVEN LVLERLSAQS PLRVLFDVVP GIKFQDAISL ISMQPIASTA EAWKRIEDIE LMHMRYALEA IVLALGAMEE 0601: AMKDETDASH RVVFYHLKDL TNHLEAIKNV PRKIMMVNIV ISLLHIDDIR LSSTQSASSA CFSEKSNTPG LDPGDLGTEG EKEIVISFTK QLLDVLRRNL 0701: PSHPIEQECQ LDGNYSTDGR QALEWRVSMA KRFIEDCEWR LSVMQHLLPL SERQWGLKEV LSILRAAPEK LLNLCMQRAK YDIGEEAVNR FALSAEDKAT 0801: LELAEWVDNA FKGTLVEDVM SRTAEGAAAV QDLDFHSLGS QLSPLAMILL CIDAAASSAK SPTISKQLLD KSQVMLSEIY PGGAPKVGFT YWDQVHEVAI 0901: ISVLRRILKR LQEFLEQDDP QILQASFSGD TIISSCTESH RQGQKDRALA MLHQMIEDAH RGKRQFLSGK LHNLARALAD EKPEVDVLKG DGSDMAVEKD 1001: GVLGLGLKYT KQSPGSANRA VDGNPVSHET EDKGKKSFGP LSNKTSTYLS QFILYTAAIG DIVDGTDTTH DFNFFSLVYE WPKDLLTRLV FDRSSTDAAA 1101: KVAEVMSADF VHEVISACVP PVYPPRSGHG WACIPVIPTT PCSHSEGKVL SPSIEAKPNC YVRSSATPGV PLYPLQLDVI RHLVKISPVR AVLACVFGGS 1201: ILYNGSDSII SSSLNDEFPS SPDADRLFYE FSLDQSERYP TLNRWIQMQT NLHRVSEFVV TPKQKPDDTR IKPDERTGIK RLLEHDSDSE SDTEETFSKN 1301: NIQPALTDGS ARDGGSFENG VCRTDPTVFL SFDWENEVPY EKAVNRLIDE GKLMDALALS DRFLRNGASD WLLQLLIKSR EENPSTSGRS QGYGGQSNSW 1401: QYCLRLKDKQ LAATLALKYM HTWELEAALN VLTMCSCHLL ESDPISLEVL HRRQALQKYS HILSADDRHN SWQEVEAECK EDPEGLALRL AGKGAVSAAL 1501: EVAESAGLSI DLRRELQGRQ LVKLLTTDPL NGGGPAEASR FLSSLQDSAD ALPVVMGAMQ LLPDLRSKQL LVHFFLKRRD SNLSDLEVAR LNSWALGLKV 1601: LAALPLPWQQ RCSSLHEHPN LIFEALLMRK QLQYASLILK EFPALRDNNV IMAYAAKAIS VTIIPPPREP RITVSASRLR QKSRAGPAVK ASFTSSLSNF 1701: QREARRAFSW APRNAENRTT SKDVYRKRKN SGLGASERAA WEAMTGIQED QGSSYSADGQ DRLPSVSIAE EWMLTGDKTK DEGVRASHKY ESTPDIILFK 1801: ALLSLCSDEL VSARSAMDLC ISQMKNVLSS KQLSEGASVE TIGRAYHATE AFVQGLSYAK SLLRKLLGTT ESTNNNGERS RDVDDISSDA GSSSVGSQST 1901: DEPSDVLSLT EIWLGRAELL QSLLGSGIST SLDDIADQLS SECLRDRLIS DERYSMAVYM CKKCKIDVFP VWKAWGLALL RMERYAQARV KFKQAFQLKG 2001: EDIPDVIQEI INTIEGGPPV DVSIVRSMYD HLAKSAPTIL DDSLSADSYL NVLHMPSTFP RSERSRRSLE SEKNSSVPGS DFEDGPRSNL DTTRYSECTN 2101: YLQEHARQNL LGFMFRHGHF KDACMLFFPQ SGLPPPLQTS SVGAVSTSSS PQRTDPLATE YGTIESLCEF CVGYGAISSL EEVITERLES AKNQDQAINQ 2201: YIAGALTRIC AFFEINRHFN YLYKFLVLKK DYVTSGYCCI QLFMNSTTQE DAVRHLEHAK AHFEEALTAR HRGSDSKKLV TKGVRGKSAA EKLSEETLVK 2301: LSSRVKMQID VVKSFSDSEG APWKHSLFGN PNDSETSRRR CEIVETLVEK NFDLAYSVIY EFKLSAVDIY AGVATSLADR KKGSQLTELF KNIKGTIQDD 2401: DWDQVLGAAI NIYANKHKER PDRLIDMLTS SHRKVLACVV CGRLKSAFQI ASKSGSVADV QYVAHQALHA NSHTVLDMCK QWLAKYM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)